Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 MCCD1P1-208ENST00000445732 328 ntBASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AP000550.4-202ENST00000639755 178 ntBASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.66□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 PCED1CP-201ENST00000419887 785 ntBASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 GPAT2P1-201ENST00000444924 1672 ntBASIC14.65□□□□□ -0.06
TCRBV4S1A1TA0A5B7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.65□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 IER3-202ENST00000376377 1350 ntBASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AL023284.2-201ENST00000405850 579 ntBASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC112907.2-201ENST00000448639 330 ntBASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC034232.1-201ENST00000506026 1064 ntBASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AC112777.1-201ENST00000540175 1423 ntBASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 AL499627.1-201ENST00000569373 2188 ntBASIC14.64□□□□□ -0.07
TCRBV4S1A1TA0A5B7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms