Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 HLA-F-220ENST00000434407 884 ntBASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 VENTXP5-201ENST00000523979 775 ntBASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AC008687.5-201ENST00000593746 558 ntBASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 HBZP1-201ENST00000354915 429 ntBASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 SPDYE13P-201ENST00000445314 798 ntBASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AC092597.1-201ENST00000487352 616 ntBASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 PKD1P1-201ENST00000458669 6805 ntBASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 PHGDH-209ENST00000641074 1780 ntBASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 HTR7P1-202ENST00000624664 4411 ntBASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 NEFHP1-201ENST00000412845 2629 ntBASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 ABALON-201ENST00000629058 1903 ntBASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms