Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 AL162741.1-201ENST00000565563 1558 ntBASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 MIR662-201ENST00000384847 95 ntBASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 MIR3180-1-201ENST00000580374 94 ntBASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 MIR3180-3-201ENST00000584616 94 ntBASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 AC012313.10-201ENST00000623509 926 ntBASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 AL157888.1-201ENST00000631930 593 ntBASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGA6Q9Y5G7 HCG11-201ENST00000411553 5696 ntBASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 AL136038.4-201ENST00000603606 1261 ntBASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA6Q9Y5G7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms