Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 POR-209ENST00000439269 1858 ntTSL 2 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SND1-IT1Q9HBX3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 AC108860.2-201ENST00000562760 2183 ntBASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 AC063926.3-201ENST00000624734 5658 ntBASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 SLC29A4P1-201ENST00000398760 971 ntBASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 AC083906.2-201ENST00000511578 360 ntBASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 SOX15-203ENST00000570788 1093 ntBASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 MIR4758-201ENST00000577688 71 ntBASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 HLA-A-209ENST00000638375 975 ntBASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 AC068587.6-202ENST00000641839 5619 ntBASIC12.22□□□□□ -0.45
SND1-IT1Q9HBX3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 PPP1R14BP2-201ENST00000426284 444 ntBASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms