Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 AC092865.7-201ENST00000641832 219 ntBASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC40Q9H9A6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC40Q9H9A6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC40Q9H9A6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC40Q9H9A6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC40Q9H9A6 LINC01126-201ENST00000623515 1646 ntBASIC18.52■□□□□ 0.55
LRRC40Q9H9A6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
LRRC40Q9H9A6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC40Q9H9A6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
LRRC40Q9H9A6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.52■□□□□ 0.55
LRRC40Q9H9A6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LRRC40Q9H9A6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 AC093010.1-201ENST00000473625 1624 ntBASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 MIR3917-201ENST00000580971 93 ntBASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 AC067852.2-201ENST00000590513 2313 ntBASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.5■□□□□ 0.55
LRRC40Q9H9A6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 AC141257.4-201ENST00000634557 245 ntBASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 AC136944.6-201ENST00000634818 245 ntBASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC40Q9H9A6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRRC40Q9H9A6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms