Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NDUFAF3Q9BU61 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 AC239809.2-201ENST00000415381 517 ntBASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 HYMAI-201ENST00000635591 3347 ntBASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NDUFAF3Q9BU61 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 AL161938.1-201ENST00000569833 2180 ntBASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 AC233263.1-201ENST00000578059 224 ntBASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 AC018553.1-201ENST00000616682 1458 ntBASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 AC023824.1-201ENST00000562945 2975 ntBASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NDUFAF3Q9BU61 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms