Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.6■□□□□ 0.25
NPAS1Q99742 AL136038.4-201ENST00000603606 1261 ntBASIC16.6■□□□□ 0.25
NPAS1Q99742 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.6■□□□□ 0.25
NPAS1Q99742 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NPAS1Q99742 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.6■□□□□ 0.25
NPAS1Q99742 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NPAS1Q99742 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NPAS1Q99742 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NPAS1Q99742 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.6■□□□□ 0.25
NPAS1Q99742 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NPAS1Q99742 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NPAS1Q99742 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS1Q99742 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.59■□□□□ 0.25
NPAS1Q99742 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS1Q99742 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS1Q99742 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.59■□□□□ 0.25
NPAS1Q99742 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.59■□□□□ 0.25
NPAS1Q99742 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS1Q99742 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS1Q99742 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.59■□□□□ 0.25
NPAS1Q99742 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS1Q99742 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS1Q99742 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS1Q99742 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
NPAS1Q99742 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS1Q99742 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS1Q99742 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.59■□□□□ 0.25
NPAS1Q99742 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.59■□□□□ 0.25
NPAS1Q99742 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
NPAS1Q99742 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS1Q99742 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS1Q99742 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.59■□□□□ 0.25
NPAS1Q99742 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS1Q99742 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS1Q99742 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS1Q99742 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
NPAS1Q99742 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NPAS1Q99742 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS1Q99742 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS1Q99742 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS1Q99742 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
NPAS1Q99742 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS1Q99742 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
NPAS1Q99742 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS1Q99742 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS1Q99742 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS1Q99742 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.58■□□□□ 0.24
NPAS1Q99742 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NPAS1Q99742 AL590326.2-201ENST00000625139 305 ntBASIC16.58■□□□□ 0.24
NPAS1Q99742 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.58■□□□□ 0.24
NPAS1Q99742 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.58■□□□□ 0.24
NPAS1Q99742 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NPAS1Q99742 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.58■□□□□ 0.24
NPAS1Q99742 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS1Q99742 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
NPAS1Q99742 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.58■□□□□ 0.24
NPAS1Q99742 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS1Q99742 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS1Q99742 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS1Q99742 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS1Q99742 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS1Q99742 AC138932.1-201ENST00000534164 6830 ntBASIC16.58■□□□□ 0.24
NPAS1Q99742 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
NPAS1Q99742 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS1Q99742 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS1Q99742 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NPAS1Q99742 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS1Q99742 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS1Q99742 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS1Q99742 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
NPAS1Q99742 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS1Q99742 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS1Q99742 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS1Q99742 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS1Q99742 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NPAS1Q99742 AC093677.2-201ENST00000600169 1863 ntBASIC16.57■□□□□ 0.24
NPAS1Q99742 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
NPAS1Q99742 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS1Q99742 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS1Q99742 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.57■□□□□ 0.24
NPAS1Q99742 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS1Q99742 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.57■□□□□ 0.24
NPAS1Q99742 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS1Q99742 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.57■□□□□ 0.24
NPAS1Q99742 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS1Q99742 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.57■□□□□ 0.24
NPAS1Q99742 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS1Q99742 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
NPAS1Q99742 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.56■□□□□ 0.24
NPAS1Q99742 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS1Q99742 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS1Q99742 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS1Q99742 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms