Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD9AQ99638 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
RAD9AQ99638 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAD9AQ99638 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RAD9AQ99638 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD9AQ99638 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD9AQ99638 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.39■□□□□ 0.69
RAD9AQ99638 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD9AQ99638 AC009947.1-201ENST00000444350 727 ntBASIC19.39■□□□□ 0.69
RAD9AQ99638 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.39■□□□□ 0.69
RAD9AQ99638 DNAJB3-202ENST00000449667 1266 ntBASIC19.39■□□□□ 0.69
RAD9AQ99638 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.39■□□□□ 0.69
RAD9AQ99638 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD9AQ99638 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.39■□□□□ 0.69
RAD9AQ99638 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.39■□□□□ 0.69
RAD9AQ99638 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD9AQ99638 AP000867.4-201ENST00000641616 219 ntBASIC19.39■□□□□ 0.69
RAD9AQ99638 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.39■□□□□ 0.69
RAD9AQ99638 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
RAD9AQ99638 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.39■□□□□ 0.69
RAD9AQ99638 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD9AQ99638 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD9AQ99638 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.39■□□□□ 0.69
RAD9AQ99638 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAD9AQ99638 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD9AQ99638 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
RAD9AQ99638 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RAD9AQ99638 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAD9AQ99638 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RAD9AQ99638 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAD9AQ99638 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAD9AQ99638 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAD9AQ99638 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAD9AQ99638 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAD9AQ99638 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAD9AQ99638 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAD9AQ99638 AC023274.1-201ENST00000418278 595 ntBASIC19.38■□□□□ 0.69
RAD9AQ99638 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.38■□□□□ 0.69
RAD9AQ99638 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.38■□□□□ 0.69
RAD9AQ99638 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.38■□□□□ 0.69
RAD9AQ99638 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.38■□□□□ 0.69
RAD9AQ99638 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAD9AQ99638 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.38■□□□□ 0.69
RAD9AQ99638 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.38■□□□□ 0.69
RAD9AQ99638 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.38■□□□□ 0.69
RAD9AQ99638 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.38■□□□□ 0.69
RAD9AQ99638 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.38■□□□□ 0.69
RAD9AQ99638 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAD9AQ99638 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAD9AQ99638 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAD9AQ99638 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD9AQ99638 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RAD9AQ99638 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD9AQ99638 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
RAD9AQ99638 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
RAD9AQ99638 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.37■□□□□ 0.69
RAD9AQ99638 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD9AQ99638 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.37■□□□□ 0.69
RAD9AQ99638 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.37■□□□□ 0.69
RAD9AQ99638 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD9AQ99638 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAD9AQ99638 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
RAD9AQ99638 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD9AQ99638 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.37■□□□□ 0.69
RAD9AQ99638 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD9AQ99638 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RAD9AQ99638 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD9AQ99638 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAD9AQ99638 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.37■□□□□ 0.69
RAD9AQ99638 AC211486.1-202ENST00000416371 468 ntBASIC19.37■□□□□ 0.69
RAD9AQ99638 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.37■□□□□ 0.69
RAD9AQ99638 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.37■□□□□ 0.69
RAD9AQ99638 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.37■□□□□ 0.69
RAD9AQ99638 AC211476.1-201ENST00000503899 468 ntBASIC19.37■□□□□ 0.69
RAD9AQ99638 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.37■□□□□ 0.69
RAD9AQ99638 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.37■□□□□ 0.69
RAD9AQ99638 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
RAD9AQ99638 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.37■□□□□ 0.69
RAD9AQ99638 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RAD9AQ99638 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD9AQ99638 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.37■□□□□ 0.69
RAD9AQ99638 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD9AQ99638 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAD9AQ99638 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.37■□□□□ 0.69
RAD9AQ99638 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAD9AQ99638 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.37■□□□□ 0.69
RAD9AQ99638 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RAD9AQ99638 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.36■□□□□ 0.69
RAD9AQ99638 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.36■□□□□ 0.69
RAD9AQ99638 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.36■□□□□ 0.69
RAD9AQ99638 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAD9AQ99638 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAD9AQ99638 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAD9AQ99638 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAD9AQ99638 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAD9AQ99638 AC112698.1-201ENST00000510299 916 ntBASIC19.36■□□□□ 0.69
RAD9AQ99638 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.36■□□□□ 0.69
RAD9AQ99638 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAD9AQ99638 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.36■□□□□ 0.69
RAD9AQ99638 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms