Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.33■□□□□ 0.52
SHDQ96IW2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHDQ96IW2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHDQ96IW2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHDQ96IW2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHDQ96IW2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHDQ96IW2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.33■□□□□ 0.52
SHDQ96IW2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHDQ96IW2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHDQ96IW2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.32■□□□□ 0.52
SHDQ96IW2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHDQ96IW2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHDQ96IW2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHDQ96IW2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
SHDQ96IW2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.32■□□□□ 0.52
SHDQ96IW2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
SHDQ96IW2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SHDQ96IW2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SHDQ96IW2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHDQ96IW2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SHDQ96IW2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.32■□□□□ 0.52
SHDQ96IW2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SHDQ96IW2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.32■□□□□ 0.52
SHDQ96IW2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SHDQ96IW2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.32■□□□□ 0.52
SHDQ96IW2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.32■□□□□ 0.52
SHDQ96IW2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SHDQ96IW2 SNHG9-202ENST00000564014 471 ntBASIC18.32■□□□□ 0.52
SHDQ96IW2 AC005829.1-201ENST00000570002 483 ntBASIC18.32■□□□□ 0.52
SHDQ96IW2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.32■□□□□ 0.52
SHDQ96IW2 AL022326.1-202ENST00000641533 845 ntBASIC18.32■□□□□ 0.52
SHDQ96IW2 MYLKP1-201ENST00000509077 1580 ntBASIC18.32■□□□□ 0.52
SHDQ96IW2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHDQ96IW2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHDQ96IW2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHDQ96IW2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.32■□□□□ 0.52
SHDQ96IW2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SHDQ96IW2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SHDQ96IW2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHDQ96IW2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHDQ96IW2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
SHDQ96IW2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SHDQ96IW2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.31■□□□□ 0.52
SHDQ96IW2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.31■□□□□ 0.52
SHDQ96IW2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHDQ96IW2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHDQ96IW2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.31■□□□□ 0.52
SHDQ96IW2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.31■□□□□ 0.52
SHDQ96IW2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.31■□□□□ 0.52
SHDQ96IW2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
SHDQ96IW2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.31■□□□□ 0.52
SHDQ96IW2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHDQ96IW2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHDQ96IW2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.31■□□□□ 0.52
SHDQ96IW2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.31■□□□□ 0.52
SHDQ96IW2 MIR3197-201ENST00000582241 73 ntBASIC18.31■□□□□ 0.52
SHDQ96IW2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.31■□□□□ 0.52
SHDQ96IW2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
SHDQ96IW2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHDQ96IW2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.31■□□□□ 0.52
SHDQ96IW2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
SHDQ96IW2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.31■□□□□ 0.52
SHDQ96IW2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.31■□□□□ 0.52
SHDQ96IW2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SHDQ96IW2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SHDQ96IW2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SHDQ96IW2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SHDQ96IW2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHDQ96IW2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHDQ96IW2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.3■□□□□ 0.52
SHDQ96IW2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SHDQ96IW2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SHDQ96IW2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHDQ96IW2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHDQ96IW2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHDQ96IW2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.3■□□□□ 0.52
SHDQ96IW2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SHDQ96IW2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.3■□□□□ 0.52
SHDQ96IW2 MCCD1P2-201ENST00000423228 335 ntBASIC18.3■□□□□ 0.52
SHDQ96IW2 AC112698.1-201ENST00000510299 916 ntBASIC18.3■□□□□ 0.52
SHDQ96IW2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.3■□□□□ 0.52
SHDQ96IW2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.3■□□□□ 0.52
SHDQ96IW2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.3■□□□□ 0.52
SHDQ96IW2 AC064836.3-201ENST00000607928 673 ntBASIC18.3■□□□□ 0.52
SHDQ96IW2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.3■□□□□ 0.52
SHDQ96IW2 AL596442.2-201ENST00000610240 980 ntBASIC18.3■□□□□ 0.52
SHDQ96IW2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SHDQ96IW2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHDQ96IW2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHDQ96IW2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SHDQ96IW2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SHDQ96IW2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHDQ96IW2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHDQ96IW2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHDQ96IW2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.3■□□□□ 0.52
SHDQ96IW2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHDQ96IW2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHDQ96IW2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHDQ96IW2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHDQ96IW2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms