Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 AC009947.2-201ENST00000444014 672 ntBASIC18.97■□□□□ 0.63
RFX6Q8HWS3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 AC067852.2-201ENST00000590513 2313 ntBASIC18.96■□□□□ 0.63
RFX6Q8HWS3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 AC010240.3-201ENST00000607688 395 ntBASIC18.96■□□□□ 0.63
RFX6Q8HWS3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 PCDHB18P-201ENST00000524813 2368 ntBASIC18.96■□□□□ 0.63
RFX6Q8HWS3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX6Q8HWS3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 AC024243.1-201ENST00000609234 778 ntBASIC18.95■□□□□ 0.62
RFX6Q8HWS3 FAM87A-204ENST00000613235 858 ntBASIC18.95■□□□□ 0.62
RFX6Q8HWS3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX6Q8HWS3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 LINC01126-201ENST00000623515 1646 ntBASIC18.94■□□□□ 0.62
RFX6Q8HWS3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 HMGA1P5-201ENST00000412453 271 ntBASIC18.94■□□□□ 0.62
RFX6Q8HWS3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFX6Q8HWS3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms