Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
PACS1Q6VY07 PHGDH-209ENST00000641074 1780 ntBASIC18.42■□□□□ 0.54
PACS1Q6VY07 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PACS1Q6VY07 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PACS1Q6VY07 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.42■□□□□ 0.54
PACS1Q6VY07 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PACS1Q6VY07 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PACS1Q6VY07 AC099343.3-201ENST00000605834 2503 ntBASIC18.42■□□□□ 0.54
PACS1Q6VY07 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PACS1Q6VY07 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 KRT8P7-201ENST00000533003 1432 ntBASIC18.41■□□□□ 0.54
PACS1Q6VY07 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PACS1Q6VY07 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.41■□□□□ 0.54
PACS1Q6VY07 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.41■□□□□ 0.54
PACS1Q6VY07 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.41■□□□□ 0.54
PACS1Q6VY07 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.41■□□□□ 0.54
PACS1Q6VY07 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.41■□□□□ 0.54
PACS1Q6VY07 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.41■□□□□ 0.54
PACS1Q6VY07 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PACS1Q6VY07 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.41■□□□□ 0.54
PACS1Q6VY07 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PACS1Q6VY07 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PACS1Q6VY07 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.41■□□□□ 0.54
PACS1Q6VY07 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.41■□□□□ 0.54
PACS1Q6VY07 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PACS1Q6VY07 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.41■□□□□ 0.54
PACS1Q6VY07 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PACS1Q6VY07 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PACS1Q6VY07 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PACS1Q6VY07 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PACS1Q6VY07 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PACS1Q6VY07 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PACS1Q6VY07 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PACS1Q6VY07 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PACS1Q6VY07 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 AC133561.5-201ENST00000635547 218 ntBASIC18.4■□□□□ 0.54
PACS1Q6VY07 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PACS1Q6VY07 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PACS1Q6VY07 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PACS1Q6VY07 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PACS1Q6VY07 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PACS1Q6VY07 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PACS1Q6VY07 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.4■□□□□ 0.54
PACS1Q6VY07 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PACS1Q6VY07 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
PACS1Q6VY07 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
PACS1Q6VY07 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.39■□□□□ 0.54
PACS1Q6VY07 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PACS1Q6VY07 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PACS1Q6VY07 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
PACS1Q6VY07 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.39■□□□□ 0.54
PACS1Q6VY07 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PACS1Q6VY07 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PACS1Q6VY07 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PACS1Q6VY07 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.39■□□□□ 0.53
PACS1Q6VY07 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PACS1Q6VY07 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.39■□□□□ 0.53
PACS1Q6VY07 SLC25A3P1-201ENST00000443844 931 ntBASIC18.39■□□□□ 0.53
PACS1Q6VY07 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PACS1Q6VY07 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.39■□□□□ 0.53
PACS1Q6VY07 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
PACS1Q6VY07 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.39■□□□□ 0.53
PACS1Q6VY07 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
PACS1Q6VY07 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PACS1Q6VY07 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms