Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
KRT40Q6A162 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.12■□□□□ 0.97
KRT40Q6A162 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT40Q6A162 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT40Q6A162 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
KRT40Q6A162 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT40Q6A162 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
KRT40Q6A162 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT40Q6A162 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.11■□□□□ 0.97
KRT40Q6A162 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT40Q6A162 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.11■□□□□ 0.97
KRT40Q6A162 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.11■□□□□ 0.97
KRT40Q6A162 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT40Q6A162 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.11■□□□□ 0.97
KRT40Q6A162 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.11■□□□□ 0.97
KRT40Q6A162 CLEC4GP1-201ENST00000596555 870 ntBASIC21.11■□□□□ 0.97
KRT40Q6A162 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.11■□□□□ 0.97
KRT40Q6A162 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT40Q6A162 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT40Q6A162 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT40Q6A162 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.11■□□□□ 0.97
KRT40Q6A162 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
KRT40Q6A162 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRT40Q6A162 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT40Q6A162 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT40Q6A162 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.11■□□□□ 0.97
KRT40Q6A162 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
KRT40Q6A162 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
KRT40Q6A162 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT40Q6A162 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRT40Q6A162 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT40Q6A162 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT40Q6A162 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT40Q6A162 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT40Q6A162 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
KRT40Q6A162 NOC2LP2-201ENST00000407594 1944 ntBASIC21.1■□□□□ 0.97
KRT40Q6A162 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT40Q6A162 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT40Q6A162 AC092647.4-201ENST00000457211 535 ntBASIC21.1■□□□□ 0.97
KRT40Q6A162 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT40Q6A162 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
KRT40Q6A162 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.1■□□□□ 0.97
KRT40Q6A162 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT40Q6A162 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.1■□□□□ 0.97
KRT40Q6A162 GCSHP2-201ENST00000560971 527 ntBASIC21.1■□□□□ 0.97
KRT40Q6A162 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT40Q6A162 AL023973.1-201ENST00000624619 620 ntBASIC21.1■□□□□ 0.97
KRT40Q6A162 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KRT40Q6A162 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT40Q6A162 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT40Q6A162 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT40Q6A162 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRT40Q6A162 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
KRT40Q6A162 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.1■□□□□ 0.97
KRT40Q6A162 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
KRT40Q6A162 IER3-202ENST00000376377 1350 ntBASIC21.1■□□□□ 0.97
KRT40Q6A162 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KRT40Q6A162 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT40Q6A162 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
KRT40Q6A162 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT40Q6A162 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
KRT40Q6A162 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
KRT40Q6A162 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
KRT40Q6A162 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
KRT40Q6A162 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT40Q6A162 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT40Q6A162 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
KRT40Q6A162 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KRT40Q6A162 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT40Q6A162 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.09■□□□□ 0.97
KRT40Q6A162 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KRT40Q6A162 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.09■□□□□ 0.97
KRT40Q6A162 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
KRT40Q6A162 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.09■□□□□ 0.97
KRT40Q6A162 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT40Q6A162 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
KRT40Q6A162 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.09■□□□□ 0.97
KRT40Q6A162 AL157888.1-201ENST00000631930 593 ntBASIC21.09■□□□□ 0.97
KRT40Q6A162 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT40Q6A162 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KRT40Q6A162 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.09■□□□□ 0.97
KRT40Q6A162 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KRT40Q6A162 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT40Q6A162 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.09■□□□□ 0.97
KRT40Q6A162 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT40Q6A162 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRT40Q6A162 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT40Q6A162 AC138028.4-201ENST00000564984 1845 ntBASIC21.08■□□□□ 0.97
KRT40Q6A162 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT40Q6A162 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT40Q6A162 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT40Q6A162 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT40Q6A162 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KRT40Q6A162 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KRT40Q6A162 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT40Q6A162 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.08■□□□□ 0.97
KRT40Q6A162 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
KRT40Q6A162 AP000523.1-201ENST00000398242 1049 ntBASIC21.08■□□□□ 0.97
KRT40Q6A162 HCG4P8-203ENST00000443049 980 ntBASIC21.08■□□□□ 0.97
KRT40Q6A162 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms