Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM4P67936 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM4P67936 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TPM4P67936 AP002982.1-201ENST00000492365 877 ntBASIC20.44■□□□□ 0.86
TPM4P67936 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.44■□□□□ 0.86
TPM4P67936 CKBP1-201ENST00000565489 1086 ntBASIC20.44■□□□□ 0.86
TPM4P67936 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
TPM4P67936 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM4P67936 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TPM4P67936 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM4P67936 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM4P67936 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM4P67936 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.44■□□□□ 0.86
TPM4P67936 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TPM4P67936 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TPM4P67936 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.43■□□□□ 0.86
TPM4P67936 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
TPM4P67936 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TPM4P67936 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TPM4P67936 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.43■□□□□ 0.86
TPM4P67936 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM4P67936 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TPM4P67936 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TPM4P67936 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TPM4P67936 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.43■□□□□ 0.86
TPM4P67936 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM4P67936 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM4P67936 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.43■□□□□ 0.86
TPM4P67936 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TPM4P67936 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.43■□□□□ 0.86
TPM4P67936 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM4P67936 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM4P67936 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TPM4P67936 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM4P67936 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM4P67936 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.43■□□□□ 0.86
TPM4P67936 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.43■□□□□ 0.86
TPM4P67936 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
TPM4P67936 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM4P67936 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM4P67936 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TPM4P67936 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TPM4P67936 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TPM4P67936 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TPM4P67936 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TPM4P67936 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.42■□□□□ 0.86
TPM4P67936 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.42■□□□□ 0.86
TPM4P67936 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TPM4P67936 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.42■□□□□ 0.86
TPM4P67936 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.42■□□□□ 0.86
TPM4P67936 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
TPM4P67936 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.42■□□□□ 0.86
TPM4P67936 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
TPM4P67936 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.42■□□□□ 0.86
TPM4P67936 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
TPM4P67936 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
TPM4P67936 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.42■□□□□ 0.86
TPM4P67936 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.42■□□□□ 0.86
TPM4P67936 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TPM4P67936 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TPM4P67936 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TPM4P67936 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TPM4P67936 PHGDH-209ENST00000641074 1780 ntBASIC20.41■□□□□ 0.86
TPM4P67936 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM4P67936 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM4P67936 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TPM4P67936 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TPM4P67936 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM4P67936 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TPM4P67936 KSR1P1-201ENST00000446298 240 ntBASIC20.41■□□□□ 0.86
TPM4P67936 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.41■□□□□ 0.86
TPM4P67936 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.41■□□□□ 0.86
TPM4P67936 AC011298.2-201ENST00000617989 482 ntBASIC20.41■□□□□ 0.86
TPM4P67936 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.41■□□□□ 0.86
TPM4P67936 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.41■□□□□ 0.86
TPM4P67936 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM4P67936 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TPM4P67936 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM4P67936 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM4P67936 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TPM4P67936 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TPM4P67936 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.41■□□□□ 0.86
TPM4P67936 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms