Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PER3P56645 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PER3P56645 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PER3P56645 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PER3P56645 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PER3P56645 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PER3P56645 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PER3P56645 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PER3P56645 AC009113.1-201ENST00000570267 2443 ntBASIC16.85■□□□□ 0.29
PER3P56645 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PER3P56645 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PER3P56645 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
PER3P56645 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.85■□□□□ 0.29
PER3P56645 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.85■□□□□ 0.29
PER3P56645 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PER3P56645 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.85■□□□□ 0.29
PER3P56645 NOC2LP2-201ENST00000407594 1944 ntBASIC16.85■□□□□ 0.29
PER3P56645 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PER3P56645 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.85■□□□□ 0.29
PER3P56645 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.85■□□□□ 0.29
PER3P56645 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.85■□□□□ 0.29
PER3P56645 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PER3P56645 AC016734.2-201ENST00000624325 1377 ntBASIC16.85■□□□□ 0.29
PER3P56645 AC020763.4-201ENST00000623414 4170 ntBASIC16.85■□□□□ 0.29
PER3P56645 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PER3P56645 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PER3P56645 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
PER3P56645 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
PER3P56645 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PER3P56645 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PER3P56645 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PER3P56645 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.84■□□□□ 0.29
PER3P56645 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
PER3P56645 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PER3P56645 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.84■□□□□ 0.29
PER3P56645 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.84■□□□□ 0.29
PER3P56645 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PER3P56645 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.84■□□□□ 0.29
PER3P56645 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
PER3P56645 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PER3P56645 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PER3P56645 AL022342.1-201ENST00000400363 863 ntBASIC16.84■□□□□ 0.29
PER3P56645 CHCHD2P8-201ENST00000429873 447 ntBASIC16.84■□□□□ 0.29
PER3P56645 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.84■□□□□ 0.29
PER3P56645 PVRIG2P-201ENST00000435460 978 ntBASIC16.84■□□□□ 0.29
PER3P56645 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.84■□□□□ 0.29
PER3P56645 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.84■□□□□ 0.29
PER3P56645 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.84■□□□□ 0.29
PER3P56645 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PER3P56645 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PER3P56645 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.84■□□□□ 0.29
PER3P56645 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.84■□□□□ 0.29
PER3P56645 AP002414.4-201ENST00000589764 1148 ntBASIC16.84■□□□□ 0.29
PER3P56645 AC006538.3-201ENST00000612495 578 ntBASIC16.84■□□□□ 0.29
PER3P56645 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PER3P56645 AC139713.2-201ENST00000641328 2723 ntBASIC16.84■□□□□ 0.29
PER3P56645 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PER3P56645 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.84■□□□□ 0.29
PER3P56645 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PER3P56645 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.84■□□□□ 0.29
PER3P56645 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PER3P56645 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PER3P56645 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
PER3P56645 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.84■□□□□ 0.29
PER3P56645 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.84■□□□□ 0.29
PER3P56645 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PER3P56645 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PER3P56645 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PER3P56645 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.84■□□□□ 0.29
PER3P56645 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PER3P56645 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PER3P56645 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
PER3P56645 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PER3P56645 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PER3P56645 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PER3P56645 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PER3P56645 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PER3P56645 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PER3P56645 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PER3P56645 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PER3P56645 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PER3P56645 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PER3P56645 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PER3P56645 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PER3P56645 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PER3P56645 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.83■□□□□ 0.28
PER3P56645 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PER3P56645 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PER3P56645 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PER3P56645 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.83■□□□□ 0.28
PER3P56645 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.83■□□□□ 0.28
PER3P56645 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.83■□□□□ 0.28
PER3P56645 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PER3P56645 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.83■□□□□ 0.28
PER3P56645 AC012313.1-201ENST00000593393 3059 ntBASIC16.83■□□□□ 0.28
PER3P56645 AC093525.10-201ENST00000625130 1569 ntBASIC16.83■□□□□ 0.28
PER3P56645 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PER3P56645 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.83■□□□□ 0.28
PER3P56645 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.83■□□□□ 0.28
PER3P56645 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms