Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH4P55283 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH4P55283 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
CDH4P55283 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH4P55283 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH4P55283 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH4P55283 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.59■□□□□ 0.57
CDH4P55283 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH4P55283 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH4P55283 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH4P55283 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CDH4P55283 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDH4P55283 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH4P55283 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDH4P55283 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.58■□□□□ 0.57
CDH4P55283 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH4P55283 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.58■□□□□ 0.56
CDH4P55283 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CDH4P55283 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH4P55283 KRT18P65-201ENST00000439811 1286 ntBASIC18.58■□□□□ 0.56
CDH4P55283 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.58■□□□□ 0.56
CDH4P55283 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CDH4P55283 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.58■□□□□ 0.56
CDH4P55283 AC092329.2-201ENST00000598402 547 ntBASIC18.58■□□□□ 0.56
CDH4P55283 AC092119.3-201ENST00000612618 583 ntBASIC18.58■□□□□ 0.56
CDH4P55283 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.58■□□□□ 0.56
CDH4P55283 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
CDH4P55283 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH4P55283 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDH4P55283 AC135776.1-201ENST00000319817 2481 ntBASIC18.58■□□□□ 0.56
CDH4P55283 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH4P55283 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.58■□□□□ 0.56
CDH4P55283 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CDH4P55283 AC009113.1-201ENST00000570267 2443 ntBASIC18.58■□□□□ 0.56
CDH4P55283 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH4P55283 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH4P55283 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH4P55283 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH4P55283 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CDH4P55283 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
CDH4P55283 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CDH4P55283 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH4P55283 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CDH4P55283 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH4P55283 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH4P55283 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH4P55283 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH4P55283 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH4P55283 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CDH4P55283 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH4P55283 HCG4P8-203ENST00000443049 980 ntBASIC18.57■□□□□ 0.56
CDH4P55283 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH4P55283 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH4P55283 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH4P55283 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH4P55283 TPSP2-201ENST00000561760 610 ntBASIC18.57■□□□□ 0.56
CDH4P55283 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH4P55283 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.57■□□□□ 0.56
CDH4P55283 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH4P55283 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
CDH4P55283 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH4P55283 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH4P55283 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH4P55283 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH4P55283 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH4P55283 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH4P55283 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH4P55283 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH4P55283 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDH4P55283 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH4P55283 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH4P55283 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH4P55283 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH4P55283 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH4P55283 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH4P55283 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH4P55283 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH4P55283 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH4P55283 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.56■□□□□ 0.56
CDH4P55283 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.56■□□□□ 0.56
CDH4P55283 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH4P55283 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.56■□□□□ 0.56
CDH4P55283 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH4P55283 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH4P55283 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.56■□□□□ 0.56
CDH4P55283 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH4P55283 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CDH4P55283 AC104581.1-202ENST00000635932 2618 ntBASIC18.56■□□□□ 0.56
CDH4P55283 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH4P55283 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH4P55283 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH4P55283 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.56■□□□□ 0.56
CDH4P55283 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
CDH4P55283 AC132938.6-201ENST00000623828 1655 ntBASIC18.56■□□□□ 0.56
CDH4P55283 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDH4P55283 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH4P55283 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.56■□□□□ 0.56
CDH4P55283 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CDH4P55283 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDH4P55283 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms