Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.29■□□□□ 0.68
CACNA2D1P54289 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.29■□□□□ 0.68
CACNA2D1P54289 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
CACNA2D1P54289 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CACNA2D1P54289 GPR32P1-201ENST00000601788 811 ntBASIC19.29■□□□□ 0.68
CACNA2D1P54289 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
CACNA2D1P54289 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.29■□□□□ 0.68
CACNA2D1P54289 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CACNA2D1P54289 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CACNA2D1P54289 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CACNA2D1P54289 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.28■□□□□ 0.68
CACNA2D1P54289 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA2D1P54289 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.28■□□□□ 0.68
CACNA2D1P54289 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA2D1P54289 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
CACNA2D1P54289 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA2D1P54289 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA2D1P54289 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA2D1P54289 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA2D1P54289 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA2D1P54289 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.28■□□□□ 0.68
CACNA2D1P54289 HCG4P8-203ENST00000443049 980 ntBASIC19.28■□□□□ 0.68
CACNA2D1P54289 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.28■□□□□ 0.68
CACNA2D1P54289 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.28■□□□□ 0.68
CACNA2D1P54289 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.28■□□□□ 0.68
CACNA2D1P54289 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.28■□□□□ 0.68
CACNA2D1P54289 AC004263.2-201ENST00000617183 678 ntBASIC19.28■□□□□ 0.68
CACNA2D1P54289 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA2D1P54289 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA2D1P54289 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA2D1P54289 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA2D1P54289 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CACNA2D1P54289 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA2D1P54289 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA2D1P54289 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA2D1P54289 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA2D1P54289 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.28■□□□□ 0.68
CACNA2D1P54289 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA2D1P54289 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.28■□□□□ 0.68
CACNA2D1P54289 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.27■□□□□ 0.68
CACNA2D1P54289 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA2D1P54289 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CACNA2D1P54289 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA2D1P54289 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA2D1P54289 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CACNA2D1P54289 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA2D1P54289 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA2D1P54289 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA2D1P54289 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA2D1P54289 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CACNA2D1P54289 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA2D1P54289 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.27■□□□□ 0.68
CACNA2D1P54289 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA2D1P54289 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CACNA2D1P54289 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA2D1P54289 KRT18P56-201ENST00000507275 550 ntBASIC19.27■□□□□ 0.68
CACNA2D1P54289 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.27■□□□□ 0.68
CACNA2D1P54289 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA2D1P54289 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.27■□□□□ 0.68
CACNA2D1P54289 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA2D1P54289 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CACNA2D1P54289 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA2D1P54289 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CACNA2D1P54289 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CACNA2D1P54289 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CACNA2D1P54289 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.27■□□□□ 0.67
CACNA2D1P54289 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 AP002414.4-201ENST00000589764 1148 ntBASIC19.26■□□□□ 0.67
CACNA2D1P54289 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 KRT89P-201ENST00000620027 1478 ntBASIC19.26■□□□□ 0.67
CACNA2D1P54289 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms