Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ITGA8P53708 PRORSD1P-201ENST00000295112 541 ntBASIC18.71■□□□□ 0.59
ITGA8P53708 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.71■□□□□ 0.59
ITGA8P53708 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.71■□□□□ 0.59
ITGA8P53708 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.71■□□□□ 0.59
ITGA8P53708 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.71■□□□□ 0.59
ITGA8P53708 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.71■□□□□ 0.59
ITGA8P53708 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.71■□□□□ 0.59
ITGA8P53708 CD177P1-201ENST00000606252 935 ntBASIC18.71■□□□□ 0.59
ITGA8P53708 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ITGA8P53708 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.71■□□□□ 0.59
ITGA8P53708 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ITGA8P53708 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ITGA8P53708 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ITGA8P53708 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.71■□□□□ 0.59
ITGA8P53708 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
ITGA8P53708 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.71■□□□□ 0.59
ITGA8P53708 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ITGA8P53708 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ITGA8P53708 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ITGA8P53708 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.71■□□□□ 0.59
ITGA8P53708 AC080080.1-201ENST00000625121 2420 ntBASIC18.71■□□□□ 0.59
ITGA8P53708 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ITGA8P53708 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.71■□□□□ 0.59
ITGA8P53708 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ITGA8P53708 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.71■□□□□ 0.59
ITGA8P53708 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ITGA8P53708 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.71■□□□□ 0.58
ITGA8P53708 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
ITGA8P53708 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ITGA8P53708 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ITGA8P53708 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ITGA8P53708 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ITGA8P53708 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ITGA8P53708 KRT18P55-202ENST00000578578 1546 ntBASIC18.7■□□□□ 0.58
ITGA8P53708 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITGA8P53708 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ITGA8P53708 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITGA8P53708 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.7■□□□□ 0.58
ITGA8P53708 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITGA8P53708 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITGA8P53708 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITGA8P53708 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ITGA8P53708 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITGA8P53708 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITGA8P53708 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
ITGA8P53708 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITGA8P53708 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.7■□□□□ 0.58
ITGA8P53708 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.7■□□□□ 0.58
ITGA8P53708 DGCR10-201ENST00000609839 495 ntBASIC18.7■□□□□ 0.58
ITGA8P53708 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITGA8P53708 AC141586.5-201ENST00000624546 2050 ntBASIC18.7■□□□□ 0.58
ITGA8P53708 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ITGA8P53708 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITGA8P53708 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.7■□□□□ 0.58
ITGA8P53708 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITGA8P53708 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITGA8P53708 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ITGA8P53708 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.69■□□□□ 0.58
ITGA8P53708 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.69■□□□□ 0.58
ITGA8P53708 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 AC009053.2-201ENST00000563701 2365 ntBASIC18.69■□□□□ 0.58
ITGA8P53708 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ITGA8P53708 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.69■□□□□ 0.58
ITGA8P53708 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ITGA8P53708 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ITGA8P53708 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.69■□□□□ 0.58
ITGA8P53708 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ITGA8P53708 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.69■□□□□ 0.58
ITGA8P53708 AC116562.2-201ENST00000507042 360 ntBASIC18.69■□□□□ 0.58
ITGA8P53708 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.69■□□□□ 0.58
ITGA8P53708 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.69■□□□□ 0.58
ITGA8P53708 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.69■□□□□ 0.58
ITGA8P53708 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.69■□□□□ 0.58
ITGA8P53708 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ITGA8P53708 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ITGA8P53708 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ITGA8P53708 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ITGA8P53708 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ITGA8P53708 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ITGA8P53708 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ITGA8P53708 PCDHA12-202ENST00000613593 2588 ntBASIC18.68■□□□□ 0.58
ITGA8P53708 LINC01126-201ENST00000623515 1646 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms