Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
ATP6V1AP38606 PMS2P2-201ENST00000425039 1128 ntBASIC23.16■■□□□ 1.3
ATP6V1AP38606 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC23.16■■□□□ 1.3
ATP6V1AP38606 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC23.16■■□□□ 1.3
ATP6V1AP38606 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.16■■□□□ 1.3
ATP6V1AP38606 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATP6V1AP38606 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V1AP38606 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC23.15■■□□□ 1.3
ATP6V1AP38606 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V1AP38606 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V1AP38606 MIR3687-2-201ENST00000577708 61 ntBASIC23.15■■□□□ 1.3
ATP6V1AP38606 MIR3687-1-201ENST00000614492 61 ntBASIC23.15■■□□□ 1.3
ATP6V1AP38606 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V1AP38606 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V1AP38606 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC23.15■■□□□ 1.3
ATP6V1AP38606 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
ATP6V1AP38606 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ATP6V1AP38606 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC23.14■■□□□ 1.3
ATP6V1AP38606 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
ATP6V1AP38606 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
ATP6V1AP38606 AL499627.1-201ENST00000569373 2188 ntBASIC23.14■■□□□ 1.3
ATP6V1AP38606 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
ATP6V1AP38606 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC23.14■■□□□ 1.3
ATP6V1AP38606 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP6V1AP38606 CTNS-203ENST00000399306 803 ntTSL 3 BASIC23.14■■□□□ 1.29
ATP6V1AP38606 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP6V1AP38606 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ATP6V1AP38606 AC007967.2-201ENST00000432613 625 ntBASIC23.14■■□□□ 1.29
ATP6V1AP38606 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC23.14■■□□□ 1.29
ATP6V1AP38606 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ATP6V1AP38606 HS6ST1P1-201ENST00000481504 1234 ntBASIC23.14■■□□□ 1.29
ATP6V1AP38606 AC112698.1-201ENST00000510299 916 ntBASIC23.14■■□□□ 1.29
ATP6V1AP38606 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC23.14■■□□□ 1.29
ATP6V1AP38606 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC23.14■■□□□ 1.29
ATP6V1AP38606 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP6V1AP38606 AL355385.1-201ENST00000606123 409 ntBASIC23.14■■□□□ 1.29
ATP6V1AP38606 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP6V1AP38606 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATP6V1AP38606 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.14■■□□□ 1.29
ATP6V1AP38606 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V1AP38606 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V1AP38606 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V1AP38606 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC23.13■■□□□ 1.29
ATP6V1AP38606 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC23.13■■□□□ 1.29
ATP6V1AP38606 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V1AP38606 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
ATP6V1AP38606 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
ATP6V1AP38606 DNAJB3-201ENST00000446806 729 ntBASIC23.13■■□□□ 1.29
ATP6V1AP38606 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V1AP38606 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC23.13■■□□□ 1.29
ATP6V1AP38606 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
ATP6V1AP38606 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V1AP38606 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V1AP38606 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V1AP38606 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V1AP38606 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V1AP38606 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V1AP38606 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V1AP38606 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V1AP38606 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V1AP38606 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
ATP6V1AP38606 AFG3L1P-217ENST00000557444 2447 ntBASIC23.12■■□□□ 1.29
ATP6V1AP38606 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V1AP38606 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V1AP38606 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V1AP38606 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V1AP38606 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V1AP38606 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V1AP38606 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V1AP38606 PMP22-202ENST00000395936 816 ntTSL 3 BASIC23.12■■□□□ 1.29
ATP6V1AP38606 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
ATP6V1AP38606 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.12■■□□□ 1.29
ATP6V1AP38606 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC23.12■■□□□ 1.29
ATP6V1AP38606 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V1AP38606 SRP19-202ENST00000445150 833 ntTSL 2 BASIC23.12■■□□□ 1.29
ATP6V1AP38606 URGCP-206ENST00000446958 365 ntTSL 2 BASIC23.12■■□□□ 1.29
ATP6V1AP38606 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC23.12■■□□□ 1.29
ATP6V1AP38606 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
ATP6V1AP38606 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V1AP38606 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
ATP6V1AP38606 RNA5SP416-201ENST00000516838 111 ntBASIC23.12■■□□□ 1.29
ATP6V1AP38606 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC23.12■■□□□ 1.29
ATP6V1AP38606 RNF151-202ENST00000569210 853 ntTSL 2 BASIC23.12■■□□□ 1.29
ATP6V1AP38606 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC23.12■■□□□ 1.29
ATP6V1AP38606 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC23.12■■□□□ 1.29
ATP6V1AP38606 AP000867.4-201ENST00000641616 219 ntBASIC23.12■■□□□ 1.29
ATP6V1AP38606 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V1AP38606 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V1AP38606 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms