Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
HOXC8P31273 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC8P31273 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
HOXC8P31273 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.81■□□□□ 0.76
HOXC8P31273 FAM220CP-201ENST00000395253 831 ntBASIC19.81■□□□□ 0.76
HOXC8P31273 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC8P31273 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXC8P31273 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC8P31273 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXC8P31273 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.81■□□□□ 0.76
HOXC8P31273 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC8P31273 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC8P31273 ESPNP-201ENST00000270691 2015 ntBASIC19.81■□□□□ 0.76
HOXC8P31273 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC8P31273 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOXC8P31273 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.81■□□□□ 0.76
HOXC8P31273 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC8P31273 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXC8P31273 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.8■□□□□ 0.76
HOXC8P31273 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC8P31273 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC8P31273 RPS2P1-201ENST00000434010 821 ntBASIC19.8■□□□□ 0.76
HOXC8P31273 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC8P31273 AC012640.2-201ENST00000561606 901 ntBASIC19.8■□□□□ 0.76
HOXC8P31273 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.8■□□□□ 0.76
HOXC8P31273 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC8P31273 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.8■□□□□ 0.76
HOXC8P31273 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC8P31273 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HOXC8P31273 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HOXC8P31273 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC8P31273 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
HOXC8P31273 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOXC8P31273 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.8■□□□□ 0.76
HOXC8P31273 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXC8P31273 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.79■□□□□ 0.76
HOXC8P31273 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXC8P31273 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 AC139530.3-201ENST00000620344 690 ntBASIC19.79■□□□□ 0.76
HOXC8P31273 AC073592.4-201ENST00000623827 446 ntBASIC19.79■□□□□ 0.76
HOXC8P31273 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.79■□□□□ 0.76
HOXC8P31273 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 AC093010.1-201ENST00000473625 1624 ntBASIC19.79■□□□□ 0.76
HOXC8P31273 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOXC8P31273 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HOXC8P31273 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXC8P31273 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC8P31273 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC8P31273 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC8P31273 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXC8P31273 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.78■□□□□ 0.76
HOXC8P31273 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC8P31273 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXC8P31273 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.78■□□□□ 0.76
HOXC8P31273 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.78■□□□□ 0.76
HOXC8P31273 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC8P31273 NKAPP1-205ENST00000585790 367 ntBASIC19.78■□□□□ 0.76
HOXC8P31273 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC8P31273 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.78■□□□□ 0.76
HOXC8P31273 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC8P31273 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC8P31273 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HOXC8P31273 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXC8P31273 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXC8P31273 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
HOXC8P31273 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC8P31273 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC8P31273 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC8P31273 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC8P31273 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC8P31273 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC8P31273 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.77■□□□□ 0.76
HOXC8P31273 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HOXC8P31273 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC8P31273 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXC8P31273 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
HOXC8P31273 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.77■□□□□ 0.76
HOXC8P31273 AC122714.2-201ENST00000502787 707 ntBASIC19.77■□□□□ 0.76
HOXC8P31273 POLD2P1-201ENST00000511220 997 ntBASIC19.77■□□□□ 0.76
HOXC8P31273 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.77■□□□□ 0.76
HOXC8P31273 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
HOXC8P31273 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms