Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LMO1P25800 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LMO1P25800 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.31■□□□□ 0.04
LMO1P25800 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.31■□□□□ 0.04
LMO1P25800 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LMO1P25800 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.31■□□□□ 0.04
LMO1P25800 REXO1L9P-201ENST00000604264 2108 ntBASIC15.31■□□□□ 0.04
LMO1P25800 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LMO1P25800 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LMO1P25800 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LMO1P25800 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
LMO1P25800 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LMO1P25800 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO1P25800 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LMO1P25800 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO1P25800 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO1P25800 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO1P25800 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.3■□□□□ 0.04
LMO1P25800 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
LMO1P25800 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LMO1P25800 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO1P25800 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.3■□□□□ 0.04
LMO1P25800 ECEL1P3-201ENST00000427961 737 ntBASIC15.3■□□□□ 0.04
LMO1P25800 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.3■□□□□ 0.04
LMO1P25800 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO1P25800 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO1P25800 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.3■□□□□ 0.04
LMO1P25800 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.3■□□□□ 0.04
LMO1P25800 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO1P25800 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO1P25800 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LMO1P25800 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LMO1P25800 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.3■□□□□ 0.04
LMO1P25800 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.3■□□□□ 0.04
LMO1P25800 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.3■□□□□ 0.04
LMO1P25800 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.3■□□□□ 0.04
LMO1P25800 LINC01126-201ENST00000623515 1646 ntBASIC15.3■□□□□ 0.04
LMO1P25800 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.3■□□□□ 0.04
LMO1P25800 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO1P25800 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO1P25800 TNRC18P3-201ENST00000441896 2691 ntBASIC15.3■□□□□ 0.04
LMO1P25800 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.29■□□□□ 0.04
LMO1P25800 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LMO1P25800 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.29■□□□□ 0.04
LMO1P25800 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.29■□□□□ 0.04
LMO1P25800 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 AC093010.1-201ENST00000473625 1624 ntBASIC15.29■□□□□ 0.04
LMO1P25800 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LMO1P25800 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.29■□□□□ 0.04
LMO1P25800 AC087499.1-201ENST00000418141 1075 ntBASIC15.29■□□□□ 0.04
LMO1P25800 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.29■□□□□ 0.04
LMO1P25800 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.29■□□□□ 0.04
LMO1P25800 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.29■□□□□ 0.04
LMO1P25800 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.29■□□□□ 0.04
LMO1P25800 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.29■□□□□ 0.04
LMO1P25800 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.29■□□□□ 0.04
LMO1P25800 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.29■□□□□ 0.04
LMO1P25800 MIR3917-201ENST00000580971 93 ntBASIC15.29■□□□□ 0.04
LMO1P25800 AC024243.1-201ENST00000609234 778 ntBASIC15.29■□□□□ 0.04
LMO1P25800 AL138966.2-201ENST00000621997 464 ntBASIC15.29■□□□□ 0.04
LMO1P25800 AC092865.7-201ENST00000641832 219 ntBASIC15.29■□□□□ 0.04
LMO1P25800 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.29■□□□□ 0.04
LMO1P25800 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LMO1P25800 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LMO1P25800 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 AL024508.2-201ENST00000607749 1894 ntBASIC15.29■□□□□ 0.04
LMO1P25800 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO1P25800 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
LMO1P25800 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.28■□□□□ 0.04
LMO1P25800 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LMO1P25800 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.28■□□□□ 0.04
LMO1P25800 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.28■□□□□ 0.04
LMO1P25800 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.28■□□□□ 0.04
LMO1P25800 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO1P25800 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms