Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP24386 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHMP24386 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CHMP24386 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP24386 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP24386 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP24386 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP24386 AC093677.2-201ENST00000600169 1863 ntBASIC17.04■□□□□ 0.32
CHMP24386 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CHMP24386 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.04■□□□□ 0.32
CHMP24386 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.04■□□□□ 0.32
CHMP24386 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
CHMP24386 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.04■□□□□ 0.32
CHMP24386 BX664615.1-201ENST00000443558 458 ntBASIC17.04■□□□□ 0.32
CHMP24386 KRT18P57-201ENST00000443599 1254 ntBASIC17.04■□□□□ 0.32
CHMP24386 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CHMP24386 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.04■□□□□ 0.32
CHMP24386 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP24386 LINC00896-202ENST00000609602 2128 ntBASIC17.04■□□□□ 0.32
CHMP24386 AL138966.2-201ENST00000621997 464 ntBASIC17.04■□□□□ 0.32
CHMP24386 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP24386 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP24386 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP24386 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
CHMP24386 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP24386 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP24386 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
CHMP24386 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP24386 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP24386 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP24386 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.04■□□□□ 0.32
CHMP24386 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.04■□□□□ 0.32
CHMP24386 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CHMP24386 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP24386 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CHMP24386 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP24386 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP24386 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.04■□□□□ 0.32
CHMP24386 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP24386 GNAS-203ENST00000306120 1878 ntBASIC17.03■□□□□ 0.32
CHMP24386 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHMP24386 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP24386 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
CHMP24386 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CHMP24386 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.03■□□□□ 0.32
CHMP24386 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHMP24386 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.03■□□□□ 0.32
CHMP24386 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHMP24386 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
CHMP24386 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP24386 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CHMP24386 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.03■□□□□ 0.32
CHMP24386 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.03■□□□□ 0.32
CHMP24386 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.03■□□□□ 0.32
CHMP24386 MYC-208ENST00000641036 567 ntBASIC17.03■□□□□ 0.32
CHMP24386 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP24386 KRT8P32-201ENST00000512863 1461 ntBASIC17.03■□□□□ 0.32
CHMP24386 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CHMP24386 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.03■□□□□ 0.32
CHMP24386 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHMP24386 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP24386 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP24386 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP24386 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP24386 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.02■□□□□ 0.32
CHMP24386 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CHMP24386 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP24386 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CHMP24386 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHMP24386 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP24386 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP24386 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP24386 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP24386 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.02■□□□□ 0.32
CHMP24386 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.02■□□□□ 0.32
CHMP24386 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP24386 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms