Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CSB-PGBD3P0DP91 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CSB-PGBD3P0DP91 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
CSB-PGBD3P0DP91 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
CSB-PGBD3P0DP91 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CSB-PGBD3P0DP91 AL049812.1-201ENST00000432563 2267 ntBASIC24.08■■□□□ 1.44
CSB-PGBD3P0DP91 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.08■■□□□ 1.44
CSB-PGBD3P0DP91 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
CSB-PGBD3P0DP91 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.08■■□□□ 1.44
CSB-PGBD3P0DP91 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.08■■□□□ 1.44
CSB-PGBD3P0DP91 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 AL139424.1-201ENST00000607572 797 ntBASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 AC008735.5-201ENST00000623544 497 ntBASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 AL139288.1-201ENST00000623748 933 ntBASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSB-PGBD3P0DP91 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 RPSAP43-201ENST00000402237 625 ntBASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 CENPM-204ENST00000402420 688 ntTSL 5 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 GPX1P2-201ENST00000429271 606 ntBASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 NKAPP1-205ENST00000585790 367 ntBASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC24.06■■□□□ 1.44
CSB-PGBD3P0DP91 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 MTDHP4-201ENST00000600287 670 ntBASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CSB-PGBD3P0DP91 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CSB-PGBD3P0DP91 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms