Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 AC024563.2-201ENST00000603282 481 ntBASIC18.48■□□□□ 0.55
HLA-DQB2P05538 AC083849.1-201ENST00000615227 514 ntBASIC18.48■□□□□ 0.55
HLA-DQB2P05538 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 LINC01311-201ENST00000565162 1445 ntBASIC18.48■□□□□ 0.55
HLA-DQB2P05538 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQB2P05538 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 SPDYE13P-201ENST00000445314 798 ntBASIC18.47■□□□□ 0.55
HLA-DQB2P05538 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 AC132938.6-201ENST00000623828 1655 ntBASIC18.47■□□□□ 0.55
HLA-DQB2P05538 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DQB2P05538 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 AC138028.4-201ENST00000564984 1845 ntBASIC18.46■□□□□ 0.55
HLA-DQB2P05538 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 LINC00167-201ENST00000530583 1419 ntBASIC18.46■□□□□ 0.55
HLA-DQB2P05538 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.46■□□□□ 0.55
HLA-DQB2P05538 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms