Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE6O95741 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE6O95741 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.88■□□□□ 0.45
CPNE6O95741 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE6O95741 FZD10-202ENST00000539839 3282 ntBASIC17.88■□□□□ 0.45
CPNE6O95741 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE6O95741 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.88■□□□□ 0.45
CPNE6O95741 AC026396.1-201ENST00000419388 421 ntBASIC17.88■□□□□ 0.45
CPNE6O95741 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE6O95741 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.88■□□□□ 0.45
CPNE6O95741 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE6O95741 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.88■□□□□ 0.45
CPNE6O95741 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.88■□□□□ 0.45
CPNE6O95741 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.88■□□□□ 0.45
CPNE6O95741 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.88■□□□□ 0.45
CPNE6O95741 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE6O95741 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE6O95741 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CPNE6O95741 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.88■□□□□ 0.45
CPNE6O95741 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CPNE6O95741 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE6O95741 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CPNE6O95741 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE6O95741 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE6O95741 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE6O95741 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE6O95741 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE6O95741 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE6O95741 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CPNE6O95741 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPNE6O95741 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CPNE6O95741 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE6O95741 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CPNE6O95741 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CPNE6O95741 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.87■□□□□ 0.45
CPNE6O95741 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CPNE6O95741 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CPNE6O95741 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE6O95741 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CPNE6O95741 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE6O95741 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.87■□□□□ 0.45
CPNE6O95741 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE6O95741 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.87■□□□□ 0.45
CPNE6O95741 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE6O95741 PVRIG2P-201ENST00000435460 978 ntBASIC17.87■□□□□ 0.45
CPNE6O95741 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.87■□□□□ 0.45
CPNE6O95741 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
CPNE6O95741 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE6O95741 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.87■□□□□ 0.45
CPNE6O95741 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE6O95741 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.87■□□□□ 0.45
CPNE6O95741 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE6O95741 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.87■□□□□ 0.45
CPNE6O95741 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CPNE6O95741 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE6O95741 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.87■□□□□ 0.45
CPNE6O95741 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE6O95741 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE6O95741 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE6O95741 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE6O95741 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.87■□□□□ 0.45
CPNE6O95741 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE6O95741 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE6O95741 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE6O95741 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE6O95741 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE6O95741 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE6O95741 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE6O95741 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.87■□□□□ 0.45
CPNE6O95741 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE6O95741 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPNE6O95741 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE6O95741 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.86■□□□□ 0.45
CPNE6O95741 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE6O95741 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE6O95741 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE6O95741 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE6O95741 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE6O95741 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CPNE6O95741 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE6O95741 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE6O95741 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE6O95741 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.86■□□□□ 0.45
CPNE6O95741 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.86■□□□□ 0.45
CPNE6O95741 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.86■□□□□ 0.45
CPNE6O95741 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CPNE6O95741 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CPNE6O95741 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.86■□□□□ 0.45
CPNE6O95741 KRT18P1-202ENST00000452408 1331 ntBASIC17.86■□□□□ 0.45
CPNE6O95741 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE6O95741 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CPNE6O95741 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE6O95741 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.86■□□□□ 0.45
CPNE6O95741 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE6O95741 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE6O95741 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CPNE6O95741 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CPNE6O95741 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE6O95741 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE6O95741 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms