Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RTN3O95197 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RTN3O95197 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTN3O95197 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN3O95197 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTN3O95197 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN3O95197 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
RTN3O95197 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTN3O95197 CROCCP3-202ENST00000420820 1947 ntBASIC19.17■□□□□ 0.66
RTN3O95197 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RTN3O95197 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.17■□□□□ 0.66
RTN3O95197 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTN3O95197 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN3O95197 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.17■□□□□ 0.66
RTN3O95197 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.17■□□□□ 0.66
RTN3O95197 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN3O95197 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN3O95197 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN3O95197 AL024508.2-201ENST00000607749 1894 ntBASIC19.16■□□□□ 0.66
RTN3O95197 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RTN3O95197 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RTN3O95197 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
RTN3O95197 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTN3O95197 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.16■□□□□ 0.66
RTN3O95197 GUSBP12-201ENST00000513727 720 ntBASIC19.16■□□□□ 0.66
RTN3O95197 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.16■□□□□ 0.66
RTN3O95197 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.16■□□□□ 0.66
RTN3O95197 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.16■□□□□ 0.66
RTN3O95197 IGHV3-41-201ENST00000613121 348 ntBASIC19.16■□□□□ 0.66
RTN3O95197 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.16■□□□□ 0.66
RTN3O95197 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN3O95197 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.16■□□□□ 0.66
RTN3O95197 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTN3O95197 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN3O95197 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.16■□□□□ 0.66
RTN3O95197 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.16■□□□□ 0.66
RTN3O95197 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN3O95197 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RTN3O95197 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RTN3O95197 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTN3O95197 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTN3O95197 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTN3O95197 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN3O95197 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTN3O95197 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.15■□□□□ 0.66
RTN3O95197 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
RTN3O95197 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RTN3O95197 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN3O95197 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTN3O95197 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.15■□□□□ 0.66
RTN3O95197 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN3O95197 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN3O95197 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.15■□□□□ 0.66
RTN3O95197 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN3O95197 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.15■□□□□ 0.66
RTN3O95197 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTN3O95197 DRAXINP1-201ENST00000437611 948 ntBASIC19.15■□□□□ 0.66
RTN3O95197 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.15■□□□□ 0.66
RTN3O95197 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTN3O95197 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.15■□□□□ 0.66
RTN3O95197 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.15■□□□□ 0.66
RTN3O95197 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.15■□□□□ 0.66
RTN3O95197 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.15■□□□□ 0.66
RTN3O95197 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RTN3O95197 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN3O95197 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.15■□□□□ 0.66
RTN3O95197 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN3O95197 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN3O95197 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
RTN3O95197 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN3O95197 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN3O95197 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTN3O95197 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.15■□□□□ 0.66
RTN3O95197 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
RTN3O95197 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RTN3O95197 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN3O95197 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTN3O95197 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN3O95197 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN3O95197 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RTN3O95197 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.14■□□□□ 0.65
RTN3O95197 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN3O95197 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTN3O95197 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.14■□□□□ 0.65
RTN3O95197 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN3O95197 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RTN3O95197 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTN3O95197 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTN3O95197 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
RTN3O95197 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.14■□□□□ 0.65
RTN3O95197 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.14■□□□□ 0.65
RTN3O95197 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTN3O95197 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.14■□□□□ 0.65
RTN3O95197 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.14■□□□□ 0.65
RTN3O95197 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.14■□□□□ 0.65
RTN3O95197 AC004263.2-201ENST00000617183 678 ntBASIC19.14■□□□□ 0.65
RTN3O95197 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.14■□□□□ 0.65
RTN3O95197 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.14■□□□□ 0.65
RTN3O95197 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.14■□□□□ 0.65
RTN3O95197 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms