Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX2-2O95096 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-2O95096 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NKX2-2O95096 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
NKX2-2O95096 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
NKX2-2O95096 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.81■□□□□ 0.28
NKX2-2O95096 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NKX2-2O95096 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NKX2-2O95096 AC008764.6-201ENST00000595909 2069 ntBASIC16.81■□□□□ 0.28
NKX2-2O95096 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NKX2-2O95096 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.81■□□□□ 0.28
NKX2-2O95096 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
NKX2-2O95096 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NKX2-2O95096 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.81■□□□□ 0.28
NKX2-2O95096 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.81■□□□□ 0.28
NKX2-2O95096 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.81■□□□□ 0.28
NKX2-2O95096 FAM8A6P-201ENST00000407496 1135 ntBASIC16.81■□□□□ 0.28
NKX2-2O95096 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.81■□□□□ 0.28
NKX2-2O95096 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.81■□□□□ 0.28
NKX2-2O95096 AC092597.1-201ENST00000487352 616 ntBASIC16.81■□□□□ 0.28
NKX2-2O95096 AC063952.2-201ENST00000498792 1227 ntBASIC16.81■□□□□ 0.28
NKX2-2O95096 DUTP2-201ENST00000519164 463 ntBASIC16.81■□□□□ 0.28
NKX2-2O95096 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.81■□□□□ 0.28
NKX2-2O95096 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.81■□□□□ 0.28
NKX2-2O95096 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NKX2-2O95096 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NKX2-2O95096 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NKX2-2O95096 AC132938.6-201ENST00000623828 1655 ntBASIC16.81■□□□□ 0.28
NKX2-2O95096 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.81■□□□□ 0.28
NKX2-2O95096 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-2O95096 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NKX2-2O95096 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NKX2-2O95096 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NKX2-2O95096 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 LINC00167-201ENST00000530583 1419 ntBASIC16.8■□□□□ 0.28
NKX2-2O95096 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.8■□□□□ 0.28
NKX2-2O95096 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.8■□□□□ 0.28
NKX2-2O95096 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
NKX2-2O95096 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
NKX2-2O95096 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NKX2-2O95096 AP000997.3-201ENST00000623333 2250 ntBASIC16.8■□□□□ 0.28
NKX2-2O95096 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.8■□□□□ 0.28
NKX2-2O95096 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.8■□□□□ 0.28
NKX2-2O95096 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 AL359075.1-203ENST00000462729 1002 ntBASIC16.8■□□□□ 0.28
NKX2-2O95096 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
NKX2-2O95096 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.8■□□□□ 0.28
NKX2-2O95096 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.8■□□□□ 0.28
NKX2-2O95096 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.8■□□□□ 0.28
NKX2-2O95096 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.8■□□□□ 0.28
NKX2-2O95096 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.8■□□□□ 0.28
NKX2-2O95096 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NKX2-2O95096 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.8■□□□□ 0.28
NKX2-2O95096 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.8■□□□□ 0.28
NKX2-2O95096 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-2O95096 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NKX2-2O95096 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NKX2-2O95096 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.79■□□□□ 0.28
NKX2-2O95096 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NKX2-2O95096 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.79■□□□□ 0.28
NKX2-2O95096 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms