Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.43■□□□□ 0.22
PTP4A3O75365 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.43■□□□□ 0.22
PTP4A3O75365 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.43■□□□□ 0.22
PTP4A3O75365 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.43■□□□□ 0.22
PTP4A3O75365 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PTP4A3O75365 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.43■□□□□ 0.22
PTP4A3O75365 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTP4A3O75365 TNRC18P3-201ENST00000441896 2691 ntBASIC16.43■□□□□ 0.22
PTP4A3O75365 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTP4A3O75365 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.43■□□□□ 0.22
PTP4A3O75365 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.43■□□□□ 0.22
PTP4A3O75365 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTP4A3O75365 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.43■□□□□ 0.22
PTP4A3O75365 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTP4A3O75365 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.43■□□□□ 0.22
PTP4A3O75365 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PTP4A3O75365 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.43■□□□□ 0.22
PTP4A3O75365 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTP4A3O75365 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTP4A3O75365 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.42■□□□□ 0.22
PTP4A3O75365 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PTP4A3O75365 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.42■□□□□ 0.22
PTP4A3O75365 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.42■□□□□ 0.22
PTP4A3O75365 TSPY14P-201ENST00000303979 915 ntBASIC16.42■□□□□ 0.22
PTP4A3O75365 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.42■□□□□ 0.22
PTP4A3O75365 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PTP4A3O75365 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.42■□□□□ 0.22
PTP4A3O75365 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.42■□□□□ 0.22
PTP4A3O75365 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.42■□□□□ 0.22
PTP4A3O75365 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.42■□□□□ 0.22
PTP4A3O75365 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PTP4A3O75365 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PTP4A3O75365 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.42■□□□□ 0.22
PTP4A3O75365 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
PTP4A3O75365 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PTP4A3O75365 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.42■□□□□ 0.22
PTP4A3O75365 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTP4A3O75365 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PTP4A3O75365 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTP4A3O75365 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTP4A3O75365 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTP4A3O75365 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTP4A3O75365 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTP4A3O75365 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTP4A3O75365 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.41■□□□□ 0.22
PTP4A3O75365 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PTP4A3O75365 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTP4A3O75365 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTP4A3O75365 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.41■□□□□ 0.22
PTP4A3O75365 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PTP4A3O75365 MIR1238-201ENST00000408483 83 ntBASIC16.41■□□□□ 0.22
PTP4A3O75365 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.41■□□□□ 0.22
PTP4A3O75365 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.41■□□□□ 0.22
PTP4A3O75365 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.41■□□□□ 0.22
PTP4A3O75365 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.41■□□□□ 0.22
PTP4A3O75365 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTP4A3O75365 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.41■□□□□ 0.22
PTP4A3O75365 C2orf69P3-201ENST00000565542 1120 ntBASIC16.41■□□□□ 0.22
PTP4A3O75365 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.41■□□□□ 0.22
PTP4A3O75365 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.41■□□□□ 0.22
PTP4A3O75365 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTP4A3O75365 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTP4A3O75365 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTP4A3O75365 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PTP4A3O75365 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTP4A3O75365 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTP4A3O75365 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.41■□□□□ 0.22
PTP4A3O75365 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTP4A3O75365 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTP4A3O75365 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTP4A3O75365 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.4■□□□□ 0.22
PTP4A3O75365 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.4■□□□□ 0.22
PTP4A3O75365 AC099398.1-201ENST00000567919 2776 ntBASIC16.4■□□□□ 0.22
PTP4A3O75365 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTP4A3O75365 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms