Protein–RNA interactions for Protein: O75164

KDM4A, Lysine-specific demethylase 4A, humanhuman

Predictions only

Length 1,064 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4AO75164 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.76■■□□□ 1.07
KDM4AO75164 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KDM4AO75164 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
KDM4AO75164 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDM4AO75164 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
KDM4AO75164 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDM4AO75164 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KDM4AO75164 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDM4AO75164 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDM4AO75164 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.75■■□□□ 1.07
KDM4AO75164 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.75■■□□□ 1.07
KDM4AO75164 AC092597.1-201ENST00000487352 616 ntBASIC21.75■■□□□ 1.07
KDM4AO75164 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.75■■□□□ 1.07
KDM4AO75164 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.75■■□□□ 1.07
KDM4AO75164 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDM4AO75164 HYMAI.1-201ENST00000620949 238 ntBASIC21.75■■□□□ 1.07
KDM4AO75164 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDM4AO75164 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.75■■□□□ 1.07
KDM4AO75164 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
KDM4AO75164 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDM4AO75164 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDM4AO75164 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDM4AO75164 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.74■■□□□ 1.07
KDM4AO75164 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.74■■□□□ 1.07
KDM4AO75164 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.74■■□□□ 1.07
KDM4AO75164 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
KDM4AO75164 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.74■■□□□ 1.07
KDM4AO75164 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 KRT18P35-201ENST00000510488 1269 ntBASIC21.74■■□□□ 1.07
KDM4AO75164 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.74■■□□□ 1.07
KDM4AO75164 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.74■■□□□ 1.07
KDM4AO75164 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.74■■□□□ 1.07
KDM4AO75164 AL445228.2-201ENST00000605589 952 ntBASIC21.74■■□□□ 1.07
KDM4AO75164 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.74■■□□□ 1.07
KDM4AO75164 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 AC068880.1-201ENST00000507289 2297 ntBASIC21.74■■□□□ 1.07
KDM4AO75164 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.74■■□□□ 1.07
KDM4AO75164 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.74■■□□□ 1.07
KDM4AO75164 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.74■■□□□ 1.07
KDM4AO75164 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
KDM4AO75164 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.74■■□□□ 1.07
KDM4AO75164 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KDM4AO75164 SDHAP2-201ENST00000455183 2001 ntBASIC21.73■■□□□ 1.07
KDM4AO75164 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
KDM4AO75164 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.73■■□□□ 1.07
KDM4AO75164 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KDM4AO75164 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KDM4AO75164 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC21.73■■□□□ 1.07
KDM4AO75164 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KDM4AO75164 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.73■■□□□ 1.07
KDM4AO75164 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KDM4AO75164 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.73■■□□□ 1.07
KDM4AO75164 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.73■■□□□ 1.07
KDM4AO75164 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.73■■□□□ 1.07
KDM4AO75164 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.73■■□□□ 1.07
KDM4AO75164 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
KDM4AO75164 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KDM4AO75164 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KDM4AO75164 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KDM4AO75164 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KDM4AO75164 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KDM4AO75164 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KDM4AO75164 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
KDM4AO75164 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KDM4AO75164 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM4AO75164 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM4AO75164 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
KDM4AO75164 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
KDM4AO75164 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.72■■□□□ 1.07
KDM4AO75164 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.72■■□□□ 1.07
KDM4AO75164 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.72■■□□□ 1.07
KDM4AO75164 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KDM4AO75164 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KDM4AO75164 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM4AO75164 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KDM4AO75164 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM4AO75164 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM4AO75164 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.72■■□□□ 1.07
KDM4AO75164 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM4AO75164 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.72■■□□□ 1.07
KDM4AO75164 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.72■■□□□ 1.07
KDM4AO75164 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms