Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA12O60330 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA12O60330 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA12O60330 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA12O60330 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA12O60330 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA12O60330 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGA12O60330 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGA12O60330 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA12O60330 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA12O60330 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA12O60330 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.05■□□□□ 0.48
PCDHGA12O60330 AKR1C7P-201ENST00000305623 895 ntBASIC18.05■□□□□ 0.48
PCDHGA12O60330 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA12O60330 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA12O60330 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA12O60330 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGA12O60330 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA12O60330 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA12O60330 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGA12O60330 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGA12O60330 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGA12O60330 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGA12O60330 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGA12O60330 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGA12O60330 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGA12O60330 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA12O60330 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA12O60330 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA12O60330 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGA12O60330 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA12O60330 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA12O60330 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGA12O60330 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA12O60330 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA12O60330 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 NSUN5P1-202ENST00000421140 1535 ntBASIC18.04■□□□□ 0.48
PCDHGA12O60330 NSUN5P2-203ENST00000457352 1529 ntBASIC18.04■□□□□ 0.48
PCDHGA12O60330 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA12O60330 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGA12O60330 AL049812.1-201ENST00000432563 2267 ntBASIC18.04■□□□□ 0.48
PCDHGA12O60330 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGA12O60330 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA12O60330 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHGA12O60330 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDHGA12O60330 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA12O60330 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA12O60330 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGA12O60330 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA12O60330 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA12O60330 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 CROCCP3-202ENST00000420820 1947 ntBASIC18.04■□□□□ 0.48
PCDHGA12O60330 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA12O60330 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA12O60330 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGA12O60330 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA12O60330 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA12O60330 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA12O60330 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA12O60330 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA12O60330 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGA12O60330 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGA12O60330 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PCDHGA12O60330 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA12O60330 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA12O60330 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGA12O60330 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
PCDHGA12O60330 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA12O60330 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA12O60330 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA12O60330 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA12O60330 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA12O60330 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA12O60330 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGA12O60330 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA12O60330 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGA12O60330 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGA12O60330 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms