Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LCMT2O60294 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.42■□□□□ 0.38
LCMT2O60294 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.42■□□□□ 0.38
LCMT2O60294 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
LCMT2O60294 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.42■□□□□ 0.38
LCMT2O60294 AC087388.1-201ENST00000571370 1112 ntBASIC17.42■□□□□ 0.38
LCMT2O60294 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LCMT2O60294 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.42■□□□□ 0.38
LCMT2O60294 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
LCMT2O60294 AC007613.1-201ENST00000572811 2597 ntBASIC17.42■□□□□ 0.38
LCMT2O60294 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.42■□□□□ 0.38
LCMT2O60294 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LCMT2O60294 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LCMT2O60294 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LCMT2O60294 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.41■□□□□ 0.38
LCMT2O60294 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LCMT2O60294 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LCMT2O60294 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LCMT2O60294 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LCMT2O60294 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.41■□□□□ 0.38
LCMT2O60294 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LCMT2O60294 AL390961.4-201ENST00000623958 2535 ntBASIC17.41■□□□□ 0.38
LCMT2O60294 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.41■□□□□ 0.38
LCMT2O60294 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LCMT2O60294 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LCMT2O60294 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LCMT2O60294 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LCMT2O60294 KRT18P48-201ENST00000434763 852 ntBASIC17.41■□□□□ 0.38
LCMT2O60294 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.41■□□□□ 0.38
LCMT2O60294 FAM86EP-206ENST00000510506 987 ntBASIC17.41■□□□□ 0.38
LCMT2O60294 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.41■□□□□ 0.38
LCMT2O60294 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.41■□□□□ 0.38
LCMT2O60294 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.41■□□□□ 0.38
LCMT2O60294 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
LCMT2O60294 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.41■□□□□ 0.38
LCMT2O60294 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.41■□□□□ 0.38
LCMT2O60294 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LCMT2O60294 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LCMT2O60294 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.41■□□□□ 0.38
LCMT2O60294 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LCMT2O60294 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LCMT2O60294 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LCMT2O60294 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.41■□□□□ 0.38
LCMT2O60294 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.41■□□□□ 0.38
LCMT2O60294 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
LCMT2O60294 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LCMT2O60294 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.41■□□□□ 0.38
LCMT2O60294 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.41■□□□□ 0.38
LCMT2O60294 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.41■□□□□ 0.38
LCMT2O60294 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.4■□□□□ 0.38
LCMT2O60294 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LCMT2O60294 ARMC10P1-201ENST00000313754 855 ntBASIC17.4■□□□□ 0.38
LCMT2O60294 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.4■□□□□ 0.38
LCMT2O60294 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.4■□□□□ 0.38
LCMT2O60294 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.4■□□□□ 0.38
LCMT2O60294 AL136038.3-201ENST00000561909 1096 ntBASIC17.4■□□□□ 0.38
LCMT2O60294 RNF126P1-202ENST00000569893 925 ntBASIC17.4■□□□□ 0.38
LCMT2O60294 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.4■□□□□ 0.38
LCMT2O60294 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LCMT2O60294 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.4■□□□□ 0.38
LCMT2O60294 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.4■□□□□ 0.38
LCMT2O60294 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.4■□□□□ 0.38
LCMT2O60294 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCMT2O60294 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
LCMT2O60294 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LCMT2O60294 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LCMT2O60294 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.39■□□□□ 0.38
LCMT2O60294 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LCMT2O60294 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.39■□□□□ 0.37
LCMT2O60294 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.39■□□□□ 0.37
LCMT2O60294 KRT89P-201ENST00000620027 1478 ntBASIC17.39■□□□□ 0.37
LCMT2O60294 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCMT2O60294 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.39■□□□□ 0.37
LCMT2O60294 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms