Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 BX088651.1-201ENST00000540551 451 ntBASIC16.62■□□□□ 0.25
RNF13O43567 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF13O43567 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF13O43567 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF13O43567 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF13O43567 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF13O43567 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF13O43567 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
RNF13O43567 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF13O43567 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
RNF13O43567 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RNF13O43567 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF13O43567 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF13O43567 LINC00896-202ENST00000609602 2128 ntBASIC16.61■□□□□ 0.25
RNF13O43567 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF13O43567 AC134043.2-201ENST00000624206 2238 ntBASIC16.61■□□□□ 0.25
RNF13O43567 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF13O43567 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF13O43567 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RNF13O43567 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RNF13O43567 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF13O43567 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
RNF13O43567 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF13O43567 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF13O43567 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF13O43567 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF13O43567 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF13O43567 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF13O43567 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF13O43567 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF13O43567 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF13O43567 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF13O43567 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF13O43567 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF13O43567 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF13O43567 AC135776.1-201ENST00000319817 2481 ntBASIC16.61■□□□□ 0.25
RNF13O43567 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF13O43567 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF13O43567 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF13O43567 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF13O43567 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF13O43567 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF13O43567 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF13O43567 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF13O43567 AC092338.2-201ENST00000568827 1415 ntBASIC16.61■□□□□ 0.25
RNF13O43567 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF13O43567 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RNF13O43567 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
RNF13O43567 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
RNF13O43567 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF13O43567 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF13O43567 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RNF13O43567 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RNF13O43567 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF13O43567 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF13O43567 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF13O43567 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RNF13O43567 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
RNF13O43567 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF13O43567 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF13O43567 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF13O43567 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF13O43567 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RNF13O43567 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF13O43567 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF13O43567 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF13O43567 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF13O43567 AC007663.1-201ENST00000438948 1240 ntBASIC16.59■□□□□ 0.25
RNF13O43567 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF13O43567 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF13O43567 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF13O43567 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF13O43567 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms