Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN1O15353 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.73■■□□□ 1.07
FOXN1O15353 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN1O15353 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
FOXN1O15353 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN1O15353 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN1O15353 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
FOXN1O15353 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.72■■□□□ 1.07
FOXN1O15353 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
FOXN1O15353 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.72■■□□□ 1.07
FOXN1O15353 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN1O15353 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.72■■□□□ 1.07
FOXN1O15353 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN1O15353 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN1O15353 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN1O15353 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN1O15353 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN1O15353 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN1O15353 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN1O15353 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.72■■□□□ 1.07
FOXN1O15353 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN1O15353 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN1O15353 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN1O15353 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN1O15353 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.72■■□□□ 1.07
FOXN1O15353 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.72■■□□□ 1.07
FOXN1O15353 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.72■■□□□ 1.07
FOXN1O15353 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.71■■□□□ 1.07
FOXN1O15353 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
FOXN1O15353 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 CROCCP3-202ENST00000420820 1947 ntBASIC21.71■■□□□ 1.07
FOXN1O15353 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.71■■□□□ 1.07
FOXN1O15353 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
FOXN1O15353 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.71■■□□□ 1.07
FOXN1O15353 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.71■■□□□ 1.07
FOXN1O15353 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.71■■□□□ 1.07
FOXN1O15353 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.71■■□□□ 1.07
FOXN1O15353 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 AC106028.4-201ENST00000614509 607 ntBASIC21.71■■□□□ 1.07
FOXN1O15353 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.71■■□□□ 1.07
FOXN1O15353 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN1O15353 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.71■■□□□ 1.07
FOXN1O15353 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.7■■□□□ 1.07
FOXN1O15353 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
FOXN1O15353 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
FOXN1O15353 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN1O15353 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN1O15353 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
FOXN1O15353 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN1O15353 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.7■■□□□ 1.06
FOXN1O15353 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
FOXN1O15353 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN1O15353 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN1O15353 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN1O15353 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.7■■□□□ 1.06
FOXN1O15353 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.7■■□□□ 1.06
FOXN1O15353 FGFR3P6-201ENST00000457012 610 ntBASIC21.7■■□□□ 1.06
FOXN1O15353 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.7■■□□□ 1.06
FOXN1O15353 GUSBP12-201ENST00000513727 720 ntBASIC21.7■■□□□ 1.06
FOXN1O15353 AC002347.1-201ENST00000569543 541 ntBASIC21.7■■□□□ 1.06
FOXN1O15353 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.7■■□□□ 1.06
FOXN1O15353 Z83851.2-201ENST00000609564 659 ntBASIC21.7■■□□□ 1.06
FOXN1O15353 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
FOXN1O15353 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.7■■□□□ 1.06
FOXN1O15353 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.7■■□□□ 1.06
FOXN1O15353 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.7■■□□□ 1.06
FOXN1O15353 FP475955.4-201ENST00000623131 1990 ntBASIC21.7■■□□□ 1.06
FOXN1O15353 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN1O15353 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
FOXN1O15353 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN1O15353 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN1O15353 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN1O15353 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN1O15353 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.69■■□□□ 1.06
FOXN1O15353 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN1O15353 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXN1O15353 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN1O15353 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXN1O15353 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXN1O15353 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.69■■□□□ 1.06
FOXN1O15353 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXN1O15353 AC006333.2-201ENST00000607957 2099 ntBASIC21.69■■□□□ 1.06
FOXN1O15353 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN1O15353 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN1O15353 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXN1O15353 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms