Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
NDUFA1O15239 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NDUFA1O15239 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.5□□□□□ -0.41
NDUFA1O15239 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
NDUFA1O15239 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
NDUFA1O15239 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFA1O15239 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFA1O15239 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.49□□□□□ -0.41
NDUFA1O15239 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 AL023806.1-201ENST00000603994 1649 ntBASIC12.49□□□□□ -0.41
NDUFA1O15239 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFA1O15239 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NDUFA1O15239 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.49□□□□□ -0.41
NDUFA1O15239 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.49□□□□□ -0.41
NDUFA1O15239 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.49□□□□□ -0.41
NDUFA1O15239 AC239809.2-201ENST00000415381 517 ntBASIC12.49□□□□□ -0.41
NDUFA1O15239 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFA1O15239 F2R-202ENST00000505600 442 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFA1O15239 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.49□□□□□ -0.41
NDUFA1O15239 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFA1O15239 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFA1O15239 AC092666.2-201ENST00000613287 246 ntBASIC12.49□□□□□ -0.41
NDUFA1O15239 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.49□□□□□ -0.41
NDUFA1O15239 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NDUFA1O15239 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NDUFA1O15239 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFA1O15239 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFA1O15239 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NDUFA1O15239 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFA1O15239 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NDUFA1O15239 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC12.49□□□□□ -0.41
NDUFA1O15239 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
NDUFA1O15239 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.48□□□□□ -0.41
NDUFA1O15239 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.48□□□□□ -0.41
NDUFA1O15239 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.48□□□□□ -0.41
NDUFA1O15239 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.48□□□□□ -0.41
NDUFA1O15239 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NDUFA1O15239 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
NDUFA1O15239 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
NDUFA1O15239 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.48□□□□□ -0.41
NDUFA1O15239 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.48□□□□□ -0.41
NDUFA1O15239 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC12.48□□□□□ -0.41
NDUFA1O15239 RNA5SP413-201ENST00000516373 109 ntBASIC12.48□□□□□ -0.41
NDUFA1O15239 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC12.48□□□□□ -0.41
NDUFA1O15239 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.48□□□□□ -0.41
NDUFA1O15239 AC069544.1-201ENST00000609399 999 ntBASIC12.48□□□□□ -0.41
NDUFA1O15239 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
NDUFA1O15239 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
NDUFA1O15239 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
NDUFA1O15239 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
NDUFA1O15239 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NDUFA1O15239 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms