Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.53■□□□□ 0.72
FOXN3O00409 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FOXN3O00409 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN3O00409 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXN3O00409 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN3O00409 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN3O00409 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN3O00409 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN3O00409 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN3O00409 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
FOXN3O00409 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN3O00409 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN3O00409 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
FOXN3O00409 SLC25A6P5-201ENST00000435663 894 ntBASIC19.52■□□□□ 0.72
FOXN3O00409 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN3O00409 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.52■□□□□ 0.72
FOXN3O00409 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.52■□□□□ 0.72
FOXN3O00409 AL023973.1-201ENST00000624619 620 ntBASIC19.52■□□□□ 0.72
FOXN3O00409 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXN3O00409 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FOXN3O00409 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.52■□□□□ 0.72
FOXN3O00409 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
FOXN3O00409 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
FOXN3O00409 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
FOXN3O00409 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.52■□□□□ 0.71
FOXN3O00409 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
FOXN3O00409 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXN3O00409 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXN3O00409 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
FOXN3O00409 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 AC134043.2-201ENST00000624206 2238 ntBASIC19.51■□□□□ 0.71
FOXN3O00409 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 AP000523.1-201ENST00000398242 1049 ntBASIC19.51■□□□□ 0.71
FOXN3O00409 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXN3O00409 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
FOXN3O00409 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXN3O00409 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXN3O00409 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
FOXN3O00409 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
FOXN3O00409 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
FOXN3O00409 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXN3O00409 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
FOXN3O00409 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXN3O00409 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXN3O00409 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.51■□□□□ 0.71
FOXN3O00409 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.51■□□□□ 0.71
FOXN3O00409 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
FOXN3O00409 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
FOXN3O00409 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
FOXN3O00409 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
FOXN3O00409 LETM1P2-201ENST00000597330 2178 ntBASIC19.5■□□□□ 0.71
FOXN3O00409 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
FOXN3O00409 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN3O00409 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
FOXN3O00409 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN3O00409 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.5■□□□□ 0.71
FOXN3O00409 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.5■□□□□ 0.71
FOXN3O00409 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN3O00409 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
FOXN3O00409 LIN28AP1-201ENST00000429574 405 ntBASIC19.5■□□□□ 0.71
FOXN3O00409 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.5■□□□□ 0.71
FOXN3O00409 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
FOXN3O00409 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
FOXN3O00409 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN3O00409 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN3O00409 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN3O00409 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.5■□□□□ 0.71
FOXN3O00409 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.5■□□□□ 0.71
FOXN3O00409 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FOXN3O00409 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.5■□□□□ 0.71
FOXN3O00409 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.5■□□□□ 0.71
FOXN3O00409 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN3O00409 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN3O00409 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
FOXN3O00409 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
FOXN3O00409 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.49■□□□□ 0.71
FOXN3O00409 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.49■□□□□ 0.71
FOXN3O00409 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.49■□□□□ 0.71
FOXN3O00409 PVRIG2P-201ENST00000435460 978 ntBASIC19.49■□□□□ 0.71
FOXN3O00409 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.49■□□□□ 0.71
FOXN3O00409 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.49■□□□□ 0.71
FOXN3O00409 AC140113.3-201ENST00000605663 199 ntBASIC19.49■□□□□ 0.71
FOXN3O00409 AC005363.2-201ENST00000618631 242 ntBASIC19.49■□□□□ 0.71
FOXN3O00409 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN3O00409 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN3O00409 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms