Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
CDC7O00311 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDC7O00311 KRT18P22-201ENST00000402024 1347 ntBASIC17.9■□□□□ 0.46
CDC7O00311 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDC7O00311 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDC7O00311 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDC7O00311 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDC7O00311 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDC7O00311 AC093010.1-201ENST00000473625 1624 ntBASIC17.9■□□□□ 0.46
CDC7O00311 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDC7O00311 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.9■□□□□ 0.46
CDC7O00311 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDC7O00311 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDC7O00311 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CDC7O00311 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDC7O00311 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.9■□□□□ 0.46
CDC7O00311 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDC7O00311 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CDC7O00311 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDC7O00311 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDC7O00311 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDC7O00311 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDC7O00311 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDC7O00311 AC134043.2-201ENST00000624206 2238 ntBASIC17.89■□□□□ 0.45
CDC7O00311 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CDC7O00311 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.89■□□□□ 0.45
CDC7O00311 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDC7O00311 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDC7O00311 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.89■□□□□ 0.45
CDC7O00311 AL512604.3-201ENST00000569583 964 ntBASIC17.89■□□□□ 0.45
CDC7O00311 NEK4P2-201ENST00000580004 1012 ntBASIC17.89■□□□□ 0.45
CDC7O00311 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDC7O00311 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDC7O00311 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CDC7O00311 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.89■□□□□ 0.45
CDC7O00311 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDC7O00311 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDC7O00311 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDC7O00311 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDC7O00311 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDC7O00311 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDC7O00311 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDC7O00311 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDC7O00311 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.89■□□□□ 0.45
CDC7O00311 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.88■□□□□ 0.45
CDC7O00311 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.88■□□□□ 0.45
CDC7O00311 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.88■□□□□ 0.45
CDC7O00311 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.88■□□□□ 0.45
CDC7O00311 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.88■□□□□ 0.45
CDC7O00311 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CDC7O00311 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
CDC7O00311 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CDC7O00311 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
CDC7O00311 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.88■□□□□ 0.45
CDC7O00311 AC145285.6-201ENST00000604632 637 ntBASIC17.88■□□□□ 0.45
CDC7O00311 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CDC7O00311 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CDC7O00311 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.88■□□□□ 0.45
CDC7O00311 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.88■□□□□ 0.45
CDC7O00311 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CDC7O00311 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDC7O00311 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.87■□□□□ 0.45
CDC7O00311 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.87■□□□□ 0.45
CDC7O00311 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.87■□□□□ 0.45
CDC7O00311 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.87■□□□□ 0.45
CDC7O00311 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.87■□□□□ 0.45
CDC7O00311 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.87■□□□□ 0.45
CDC7O00311 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CDC7O00311 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CDC7O00311 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CDC7O00311 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.87■□□□□ 0.45
CDC7O00311 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDC7O00311 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms