Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C4orf47A7E2U8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 KRT18P28-201ENST00000453838 1332 ntBASIC17.77■□□□□ 0.44
C4orf47A7E2U8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 AL356309.3-201ENST00000624132 1934 ntBASIC17.77■□□□□ 0.44
C4orf47A7E2U8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 AC211486.1-202ENST00000416371 468 ntBASIC17.77■□□□□ 0.44
C4orf47A7E2U8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 AC211476.1-201ENST00000503899 468 ntBASIC17.77■□□□□ 0.44
C4orf47A7E2U8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 AC002347.1-201ENST00000569543 541 ntBASIC17.77■□□□□ 0.44
C4orf47A7E2U8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.77■□□□□ 0.44
C4orf47A7E2U8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
C4orf47A7E2U8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
C4orf47A7E2U8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
C4orf47A7E2U8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
C4orf47A7E2U8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.43
C4orf47A7E2U8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.77■□□□□ 0.43
C4orf47A7E2U8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
C4orf47A7E2U8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
C4orf47A7E2U8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 FEM1AP3-201ENST00000403722 1741 ntBASIC17.76■□□□□ 0.43
C4orf47A7E2U8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 AC023274.1-201ENST00000418278 595 ntBASIC17.76■□□□□ 0.43
C4orf47A7E2U8 ABCD1P5-201ENST00000445663 754 ntBASIC17.76■□□□□ 0.43
C4orf47A7E2U8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 AC068472.1-201ENST00000474589 881 ntBASIC17.76■□□□□ 0.43
C4orf47A7E2U8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 UNC93B6-202ENST00000528242 690 ntBASIC17.76■□□□□ 0.43
C4orf47A7E2U8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 AC008735.5-201ENST00000623544 497 ntBASIC17.76■□□□□ 0.43
C4orf47A7E2U8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 AL357033.4-201ENST00000617703 1807 ntBASIC17.76■□□□□ 0.43
C4orf47A7E2U8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C4orf47A7E2U8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C4orf47A7E2U8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C4orf47A7E2U8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C4orf47A7E2U8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
C4orf47A7E2U8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
C4orf47A7E2U8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C4orf47A7E2U8 KRT8P50-201ENST00000562022 1438 ntBASIC17.75■□□□□ 0.43
C4orf47A7E2U8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C4orf47A7E2U8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C4orf47A7E2U8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C4orf47A7E2U8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C4orf47A7E2U8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C4orf47A7E2U8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C4orf47A7E2U8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.75■□□□□ 0.43
C4orf47A7E2U8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
C4orf47A7E2U8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C4orf47A7E2U8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms