Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC01548A6NM66 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LINC01548A6NM66 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LINC01548A6NM66 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01548A6NM66 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01548A6NM66 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01548A6NM66 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01548A6NM66 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01548A6NM66 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01548A6NM66 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01548A6NM66 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01548A6NM66 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC01548A6NM66 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01548A6NM66 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01548A6NM66 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01548A6NM66 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 PHGDH-209ENST00000641074 1780 ntBASIC14.37□□□□□ -0.11
LINC01548A6NM66 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 NEFHP1-201ENST00000412845 2629 ntBASIC14.37□□□□□ -0.11
LINC01548A6NM66 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 IGHGP-201ENST00000390555 1178 ntBASIC14.37□□□□□ -0.11
LINC01548A6NM66 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 AC093458.2-201ENST00000623150 629 ntBASIC14.37□□□□□ -0.11
LINC01548A6NM66 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LINC01548A6NM66 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01548A6NM66 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01548A6NM66 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01548A6NM66 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01548A6NM66 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01548A6NM66 AC016734.2-201ENST00000624325 1377 ntBASIC14.36□□□□□ -0.11
LINC01548A6NM66 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
LINC01548A6NM66 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LINC01548A6NM66 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01548A6NM66 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01548A6NM66 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01548A6NM66 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01548A6NM66 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01548A6NM66 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC01548A6NM66 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01548A6NM66 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01548A6NM66 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC01548A6NM66 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC01548A6NM66 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC01548A6NM66 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC01548A6NM66 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01548A6NM66 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01548A6NM66 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC01548A6NM66 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC01548A6NM66 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01548A6NM66 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01548A6NM66 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01548A6NM66 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01548A6NM66 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01548A6NM66 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01548A6NM66 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LINC01548A6NM66 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01548A6NM66 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LINC01548A6NM66 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01548A6NM66 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LINC01548A6NM66 LINC00602-201ENST00000629776 2065 ntBASIC14.35□□□□□ -0.11
LINC01548A6NM66 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01548A6NM66 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01548A6NM66 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
LINC01548A6NM66 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01548A6NM66 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.35□□□□□ -0.11
LINC01548A6NM66 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
LINC01548A6NM66 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms