Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.15■□□□□ 0.98
SSC5DA1L4H1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.15■□□□□ 0.98
SSC5DA1L4H1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.15■□□□□ 0.98
SSC5DA1L4H1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSC5DA1L4H1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSC5DA1L4H1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSC5DA1L4H1 PMPCAP1-201ENST00000508114 1576 ntBASIC21.15■□□□□ 0.98
SSC5DA1L4H1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.15■□□□□ 0.98
SSC5DA1L4H1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.14■□□□□ 0.98
SSC5DA1L4H1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.14■□□□□ 0.98
SSC5DA1L4H1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SSC5DA1L4H1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SSC5DA1L4H1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SSC5DA1L4H1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
SSC5DA1L4H1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.14■□□□□ 0.98
SSC5DA1L4H1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.14■□□□□ 0.98
SSC5DA1L4H1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.14■□□□□ 0.98
SSC5DA1L4H1 AC005082.1-201ENST00000413042 2259 ntBASIC21.14■□□□□ 0.98
SSC5DA1L4H1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SSC5DA1L4H1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 AFG3L1P-217ENST00000557444 2447 ntBASIC21.14■□□□□ 0.97
SSC5DA1L4H1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSC5DA1L4H1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 AC108751.1-201ENST00000490852 363 ntBASIC21.13■□□□□ 0.97
SSC5DA1L4H1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSC5DA1L4H1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 AC010460.3-201ENST00000511359 1579 ntBASIC21.12■□□□□ 0.97
SSC5DA1L4H1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 KRT18P2-201ENST00000447938 1258 ntBASIC21.12■□□□□ 0.97
SSC5DA1L4H1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
SSC5DA1L4H1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 AL022326.1-202ENST00000641533 845 ntBASIC21.11■□□□□ 0.97
SSC5DA1L4H1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSC5DA1L4H1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
SSC5DA1L4H1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.1■□□□□ 0.97
SSC5DA1L4H1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms