Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV9-2A0A087WT02 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 UBALD1-205ENST00000590891 2641 ntBASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 AP006294.2-201ENST00000641667 209 ntBASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV9-2A0A087WT02 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 KRT16P6-202ENST00000425692 1426 ntBASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 MIR4651-201ENST00000582622 73 ntBASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 AL031963.3-201ENST00000606441 850 ntBASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 AC120498.8-201ENST00000614275 531 ntBASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV9-2A0A087WT02 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV9-2A0A087WT02 PCDHB19P-201ENST00000570871 2371 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms