Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA6Q9Y5G7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
PCDHGA6Q9Y5G7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA6Q9Y5G7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA6Q9Y5G7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA6Q9Y5G7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA6Q9Y5G7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA6Q9Y5G7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA6Q9Y5G7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 AC016734.2-201ENST00000624325 1377 ntBASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 AP000997.3-201ENST00000623333 2250 ntBASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 MIR3652-201ENST00000579335 131 ntBASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 MIR3917-201ENST00000580971 93 ntBASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 IRX1P1-201ENST00000438849 1838 ntBASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 AL109659.2-201ENST00000606809 1674 ntBASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PCDHGA6Q9Y5G7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGA6Q9Y5G7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 KRT8P26-201ENST00000534154 1276 ntBASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 AC079602.3-201ENST00000623931 403 ntBASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA6Q9Y5G7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms