Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB11Q9Y5F2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 MYLKP1-201ENST00000509077 1580 ntBASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 BICD1-207ENST00000551848 1962 ntBASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 SEC1P-202ENST00000473944 940 ntBASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 AC009065.1-201ENST00000564055 1225 ntBASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 AL121672.3-201ENST00000608644 468 ntBASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 AL499627.1-201ENST00000569373 2188 ntBASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB11Q9Y5F2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 MIR3180-4-201ENST00000582223 153 ntBASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB11Q9Y5F2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 TSSC2-201ENST00000450217 709 ntBASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 AC111152.3-201ENST00000569699 673 ntBASIC17.86■□□□□ 0.45
PCDHB11Q9Y5F2 AC011498.5-201ENST00000592027 486 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms