Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HCN4Q9Y3Q4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HCN4Q9Y3Q4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCN4Q9Y3Q4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.67■□□□□ 0.58
HCN4Q9Y3Q4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HCN4Q9Y3Q4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 AC116562.4-201ENST00000641316 2276 ntBASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 ALG1L5P-201ENST00000482043 771 ntBASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 AC012640.2-201ENST00000561606 901 ntBASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 AC125437.2-201ENST00000625180 2167 ntBASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.66■□□□□ 0.58
HCN4Q9Y3Q4 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 AL023284.2-201ENST00000405850 579 ntBASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 TSEN15P1-201ENST00000423257 515 ntBASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCN4Q9Y3Q4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.64■□□□□ 0.58
HCN4Q9Y3Q4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.64■□□□□ 0.58
HCN4Q9Y3Q4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HCN4Q9Y3Q4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.64■□□□□ 0.58
HCN4Q9Y3Q4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
HCN4Q9Y3Q4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 GAPDHP21-201ENST00000450301 1010 ntBASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 Z92544.3-201ENST00000624747 417 ntBASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HCN4Q9Y3Q4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HCN4Q9Y3Q4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.63■□□□□ 0.57
HCN4Q9Y3Q4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.63■□□□□ 0.57
HCN4Q9Y3Q4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms