Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 AC112777.1-201ENST00000540175 1423 ntBASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 LINC01311-201ENST00000565162 1445 ntBASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 AL031133.1-201ENST00000406807 723 ntBASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 MYC-208ENST00000641036 567 ntBASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPH3AQ9Y2J0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 WIZP1-201ENST00000531444 2299 ntBASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 MYLKP1-201ENST00000509077 1580 ntBASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.73■□□□□ 0.27
RPH3AQ9Y2J0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 AP000593.1-201ENST00000393668 712 ntBASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 DUSP5P1-201ENST00000441325 1139 ntBASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 AC126763.1-201ENST00000552015 2118 ntBASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RPH3AQ9Y2J0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RPH3AQ9Y2J0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms