Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.95■□□□□ 0.62
AP4E1Q9UPM8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.95■□□□□ 0.62
AP4E1Q9UPM8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.95■□□□□ 0.62
AP4E1Q9UPM8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.95■□□□□ 0.62
AP4E1Q9UPM8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
AP4E1Q9UPM8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
AP4E1Q9UPM8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4E1Q9UPM8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4E1Q9UPM8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP4E1Q9UPM8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4E1Q9UPM8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4E1Q9UPM8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP4E1Q9UPM8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 RN7SL850P-201ENST00000579959 291 ntBASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP4E1Q9UPM8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 STARP1-201ENST00000397973 869 ntBASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 AK4P3-201ENST00000418260 669 ntBASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
AP4E1Q9UPM8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 RNF152P1-201ENST00000397754 604 ntBASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 TSPY5P-201ENST00000426936 936 ntBASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 AC079602.3-201ENST00000623931 403 ntBASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AP4E1Q9UPM8 AC018470.1-201ENST00000624790 3129 ntBASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 AC104076.2-201ENST00000448912 469 ntBASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.91■□□□□ 0.62
AP4E1Q9UPM8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms