Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHAF3Q9NRP4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.76■□□□□ 0.27
SDHAF3Q9NRP4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHAF3Q9NRP4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHAF3Q9NRP4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHAF3Q9NRP4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHAF3Q9NRP4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SDHAF3Q9NRP4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SDHAF3Q9NRP4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 KRT18P38-201ENST00000449496 1282 ntBASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 NTF6B-201ENST00000591913 560 ntBASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 AL391807.1-203ENST00000604392 2365 ntBASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 SDHAP2-201ENST00000455183 2001 ntBASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SDHAF3Q9NRP4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 AC087388.1-201ENST00000571370 1112 ntBASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SDHAF3Q9NRP4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 HBZP1-201ENST00000354915 429 ntBASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 AC024563.2-201ENST00000603282 481 ntBASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 AC010331.1-201ENST00000611423 582 ntBASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 AC090164.3-201ENST00000610780 2143 ntBASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SDHAF3Q9NRP4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SDHAF3Q9NRP4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SDHAF3Q9NRP4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SDHAF3Q9NRP4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms