Protein–RNA interactions for Protein: Q9NQ36

SCUBE2, Signal peptide, CUB and EGF-like domain-containing protein 2, humanhuman

Predictions only

Length 999 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2Q9NQ36 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 AC009102.3-201ENST00000623118 1491 ntBASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 AL078595.1-201ENST00000404458 226 ntBASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 SPDYE15P-201ENST00000424157 909 ntBASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCUBE2Q9NQ36 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE2Q9NQ36 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SCUBE2Q9NQ36 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SCUBE2Q9NQ36 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SCUBE2Q9NQ36 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SCUBE2Q9NQ36 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 KRT18P38-201ENST00000449496 1282 ntBASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 AC069148.1-201ENST00000608741 768 ntBASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.64■□□□□ 0.57
SCUBE2Q9NQ36 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE2Q9NQ36 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SCUBE2Q9NQ36 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
SCUBE2Q9NQ36 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE2Q9NQ36 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE2Q9NQ36 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.63■□□□□ 0.57
SCUBE2Q9NQ36 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE2Q9NQ36 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.63■□□□□ 0.57
SCUBE2Q9NQ36 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE2Q9NQ36 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE2Q9NQ36 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE2Q9NQ36 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SCUBE2Q9NQ36 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE2Q9NQ36 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE2Q9NQ36 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE2Q9NQ36 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms