Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM6Q9C030 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRIM6Q9C030 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM6Q9C030 KRT18P1-202ENST00000452408 1331 ntBASIC20.02■□□□□ 0.8
TRIM6Q9C030 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRIM6Q9C030 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM6Q9C030 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6Q9C030 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6Q9C030 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM6Q9C030 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM6Q9C030 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6Q9C030 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6Q9C030 AC099343.3-201ENST00000605834 2503 ntBASIC20.02■□□□□ 0.8
TRIM6Q9C030 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6Q9C030 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6Q9C030 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6Q9C030 MIR149-201ENST00000384879 89 ntBASIC20.02■□□□□ 0.8
TRIM6Q9C030 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
TRIM6Q9C030 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.02■□□□□ 0.8
TRIM6Q9C030 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM6Q9C030 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM6Q9C030 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
TRIM6Q9C030 AP002414.4-201ENST00000589764 1148 ntBASIC20.02■□□□□ 0.8
TRIM6Q9C030 CLEC4GP1-201ENST00000596555 870 ntBASIC20.02■□□□□ 0.8
TRIM6Q9C030 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6Q9C030 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6Q9C030 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM6Q9C030 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM6Q9C030 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6Q9C030 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6Q9C030 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6Q9C030 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRIM6Q9C030 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6Q9C030 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM6Q9C030 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM6Q9C030 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM6Q9C030 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
TRIM6Q9C030 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM6Q9C030 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM6Q9C030 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM6Q9C030 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6Q9C030 MYLKP1-201ENST00000509077 1580 ntBASIC20.01■□□□□ 0.79
TRIM6Q9C030 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6Q9C030 AC009102.3-201ENST00000623118 1491 ntBASIC20.01■□□□□ 0.79
TRIM6Q9C030 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6Q9C030 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6Q9C030 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRIM6Q9C030 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6Q9C030 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM6Q9C030 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.01■□□□□ 0.79
TRIM6Q9C030 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.01■□□□□ 0.79
TRIM6Q9C030 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM6Q9C030 GPR32P1-201ENST00000601788 811 ntBASIC20.01■□□□□ 0.79
TRIM6Q9C030 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6Q9C030 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6Q9C030 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6Q9C030 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM6Q9C030 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6Q9C030 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6Q9C030 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6Q9C030 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6Q9C030 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6Q9C030 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20■□□□□ 0.79
TRIM6Q9C030 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM6Q9C030 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM6Q9C030 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM6Q9C030 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM6Q9C030 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM6Q9C030 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM6Q9C030 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM6Q9C030 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM6Q9C030 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20■□□□□ 0.79
TRIM6Q9C030 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM6Q9C030 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM6Q9C030 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM6Q9C030 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM6Q9C030 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20■□□□□ 0.79
TRIM6Q9C030 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM6Q9C030 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20■□□□□ 0.79
TRIM6Q9C030 KRT126P-201ENST00000549467 1181 ntBASIC20■□□□□ 0.79
TRIM6Q9C030 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20■□□□□ 0.79
TRIM6Q9C030 MIR3652-201ENST00000579335 131 ntBASIC20■□□□□ 0.79
TRIM6Q9C030 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20■□□□□ 0.79
TRIM6Q9C030 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20■□□□□ 0.79
TRIM6Q9C030 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20■□□□□ 0.79
TRIM6Q9C030 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM6Q9C030 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM6Q9C030 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM6Q9C030 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM6Q9C030 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM6Q9C030 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM6Q9C030 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM6Q9C030 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM6Q9C030 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM6Q9C030 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TRIM6Q9C030 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM6Q9C030 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM6Q9C030 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM6Q9C030 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TRIM6Q9C030 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms