Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 AF131216.4-201ENST00000638924 1588 ntBASIC12.74□□□□□ -0.37
VPS25Q9BRG1 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 OR7E47P-201ENST00000546390 1422 ntBASIC12.74□□□□□ -0.37
VPS25Q9BRG1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 AC144831.1-201ENST00000573312 2656 ntBASIC12.74□□□□□ -0.37
VPS25Q9BRG1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.74□□□□□ -0.37
VPS25Q9BRG1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 PAUPAR-201ENST00000630360 2965 ntBASIC12.73□□□□□ -0.37
VPS25Q9BRG1 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 AC007686.3-201ENST00000619017 3487 ntBASIC12.73□□□□□ -0.37
VPS25Q9BRG1 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 AC022616.5-201ENST00000518796 181 ntBASIC12.73□□□□□ -0.37
VPS25Q9BRG1 DUX4L4-201ENST00000566884 1269 ntBASIC12.73□□□□□ -0.37
VPS25Q9BRG1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 AC092171.3-201ENST00000610122 2651 ntBASIC12.73□□□□□ -0.37
VPS25Q9BRG1 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS25Q9BRG1 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS25Q9BRG1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms