Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMOQ99835 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.09■□□□□ 0.65
SMOQ99835 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMOQ99835 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.09■□□□□ 0.65
SMOQ99835 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SMOQ99835 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMOQ99835 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.09■□□□□ 0.65
SMOQ99835 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.09■□□□□ 0.65
SMOQ99835 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMOQ99835 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMOQ99835 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.09■□□□□ 0.65
SMOQ99835 AC093010.1-201ENST00000473625 1624 ntBASIC19.09■□□□□ 0.65
SMOQ99835 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.09■□□□□ 0.65
SMOQ99835 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMOQ99835 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMOQ99835 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMOQ99835 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMOQ99835 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMOQ99835 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMOQ99835 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.09■□□□□ 0.65
SMOQ99835 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMOQ99835 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMOQ99835 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.08■□□□□ 0.65
SMOQ99835 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SMOQ99835 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMOQ99835 AL020996.1-203ENST00000536896 2307 ntBASIC19.08■□□□□ 0.65
SMOQ99835 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.08■□□□□ 0.65
SMOQ99835 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMOQ99835 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMOQ99835 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SMOQ99835 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SMOQ99835 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMOQ99835 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SMOQ99835 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMOQ99835 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
SMOQ99835 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMOQ99835 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.08■□□□□ 0.64
SMOQ99835 LINC00265-3P-201ENST00000447588 903 ntBASIC19.08■□□□□ 0.64
SMOQ99835 TOB2P1-201ENST00000469761 992 ntBASIC19.08■□□□□ 0.64
SMOQ99835 AC068472.1-201ENST00000474589 881 ntBASIC19.08■□□□□ 0.64
SMOQ99835 AC091607.1-201ENST00000490318 1060 ntBASIC19.08■□□□□ 0.64
SMOQ99835 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.08■□□□□ 0.64
SMOQ99835 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.08■□□□□ 0.64
SMOQ99835 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
SMOQ99835 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMOQ99835 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SMOQ99835 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.08■□□□□ 0.64
SMOQ99835 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
SMOQ99835 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMOQ99835 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMOQ99835 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMOQ99835 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.08■□□□□ 0.64
SMOQ99835 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMOQ99835 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
SMOQ99835 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SMOQ99835 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.07■□□□□ 0.64
SMOQ99835 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SMOQ99835 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.07■□□□□ 0.64
SMOQ99835 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.07■□□□□ 0.64
SMOQ99835 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SMOQ99835 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.07■□□□□ 0.64
SMOQ99835 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SMOQ99835 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.07■□□□□ 0.64
SMOQ99835 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.07■□□□□ 0.64
SMOQ99835 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.07■□□□□ 0.64
SMOQ99835 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SMOQ99835 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SMOQ99835 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.07■□□□□ 0.64
SMOQ99835 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.07■□□□□ 0.64
SMOQ99835 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.07■□□□□ 0.64
SMOQ99835 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMOQ99835 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.07■□□□□ 0.64
SMOQ99835 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.06■□□□□ 0.64
SMOQ99835 AC233702.3-201ENST00000578656 1387 ntBASIC19.06■□□□□ 0.64
SMOQ99835 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMOQ99835 AL096828.2-201ENST00000567259 1965 ntBASIC19.06■□□□□ 0.64
SMOQ99835 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SMOQ99835 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.06■□□□□ 0.64
SMOQ99835 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMOQ99835 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SMOQ99835 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.06■□□□□ 0.64
SMOQ99835 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.06■□□□□ 0.64
SMOQ99835 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms