Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 AL353692.3-201ENST00000407031 1396 ntBASIC18.1■□□□□ 0.49
SCAMP4Q969E2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 AL121672.3-201ENST00000608644 468 ntBASIC18.1■□□□□ 0.49
SCAMP4Q969E2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCAMP4Q969E2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 TSSC2-201ENST00000450217 709 ntBASIC18.09■□□□□ 0.49
SCAMP4Q969E2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 AC135776.1-201ENST00000319817 2481 ntBASIC18.09■□□□□ 0.49
SCAMP4Q969E2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SCAMP4Q969E2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
SCAMP4Q969E2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SCAMP4Q969E2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCAMP4Q969E2 LINC00602-201ENST00000629776 2065 ntBASIC18.08■□□□□ 0.49
SCAMP4Q969E2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
SCAMP4Q969E2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SCAMP4Q969E2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCAMP4Q969E2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.49
SCAMP4Q969E2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SCAMP4Q969E2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCAMP4Q969E2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 AC008687.5-201ENST00000593746 558 ntBASIC18.08■□□□□ 0.48
SCAMP4Q969E2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 PHGDH-209ENST00000641074 1780 ntBASIC18.08■□□□□ 0.48
SCAMP4Q969E2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.08■□□□□ 0.48
SCAMP4Q969E2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.07■□□□□ 0.48
SCAMP4Q969E2 AP002383.4-201ENST00000442518 975 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms